Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 UBP11YKR098C 2154 nt1.78□□□□□ -2.13
RPB9P27999 KOG1YHR186C 4674 nt1.77□□□□□ -2.13
RPB9P27999 YRB1YDR002W 606 nt1.77□□□□□ -2.13
RPB9P27999 SDC1YDR469W 528 nt1.77□□□□□ -2.13
RPB9P27999 MTC7YEL033W 420 nt1.77□□□□□ -2.13
RPB9P27999 PEX4YGR133W 552 nt1.77□□□□□ -2.13
RPB9P27999 TPM2YIL138C 486 nt1.77□□□□□ -2.13
RPB9P27999 YKL044WYKL044W 321 nt1.77□□□□□ -2.13
RPB9P27999 AIM32YML050W 936 nt1.77□□□□□ -2.13
RPB9P27999 YOL013W-BYOL013W-B 291 nt1.77□□□□□ -2.13
RPB9P27999 YPL197CYPL197C 414 nt1.77□□□□□ -2.13
RPB9P27999 DAD3YBR233W-A 285 nt1.77□□□□□ -2.13
RPB9P27999 YIL080WYIL080W 4722 nt1.77□□□□□ -2.13
RPB9P27999 BRO1YPL084W 2535 nt1.77□□□□□ -2.13
RPB9P27999 PTC5YOR090C 1719 nt1.77□□□□□ -2.13
RPB9P27999 SPF1YEL031W 3648 nt1.76□□□□□ -2.13
RPB9P27999 YFH1YDL120W 525 nt1.76□□□□□ -2.13
RPB9P27999 FMP16YDR070C 282 nt1.76□□□□□ -2.13
RPB9P27999 YGL014C-AYGL014C-A 162 nt1.76□□□□□ -2.13
RPB9P27999 YGR290WYGR290W 444 nt1.76□□□□□ -2.13
RPB9P27999 URA10YMR271C 684 nt1.76□□□□□ -2.13
RPB9P27999 PHR1YOR386W 1698 nt1.76□□□□□ -2.13
RPB9P27999 NUP100YKL068W 2880 nt1.75□□□□□ -2.13
RPB9P27999 SMB1YER029C 591 nt1.75□□□□□ -2.13
RPB9P27999 YFR056CYFR056C 369 nt1.75□□□□□ -2.13
RPB9P27999 RNR4YGR180C 1038 nt1.75□□□□□ -2.13
RPB9P27999 YHR180W-AYHR180W-A 183 nt1.75□□□□□ -2.13
RPB9P27999 PEX17YNL214W 600 nt1.75□□□□□ -2.13
RPB9P27999 TAE2YPL009C 3117 nt1.75□□□□□ -2.13
RPB9P27999 GYP5YPL249C 2685 nt1.74□□□□□ -2.13
RPB9P27999 CBF2YGR140W 2871 nt1.74□□□□□ -2.13
RPB9P27999 SSD1YDR293C 3753 nt1.74□□□□□ -2.13
RPB9P27999 MDM32YOR147W 1869 nt1.74□□□□□ -2.13
RPB9P27999 RPL9AYGL147C 576 nt1.74□□□□□ -2.13
RPB9P27999 YKL111CYKL111C 336 nt1.74□□□□□ -2.13
RPB9P27999 SHE2YKL130C 741 nt1.74□□□□□ -2.13
RPB9P27999 CMS1YLR003C 876 nt1.74□□□□□ -2.13
RPB9P27999 YLR458WYLR458W 381 nt1.74□□□□□ -2.13
RPB9P27999 NOP15YNL110C 663 nt1.74□□□□□ -2.13
RPB9P27999 RPB11YOL005C 363 nt1.74□□□□□ -2.13
RPB9P27999 YOR105WYOR105W 327 nt1.74□□□□□ -2.13
RPB9P27999 REV1YOR346W 2958 nt1.74□□□□□ -2.13
RPB9P27999 NCL1YBL024W 2055 nt1.74□□□□□ -2.13
RPB9P27999 ALK2YBL009W 2031 nt1.74□□□□□ -2.13
RPB9P27999 CLN3YAL040C 1743 nt1.74□□□□□ -2.13
RPB9P27999 MSL5YLR116W 1431 nt1.74□□□□□ -2.13
RPB9P27999 RGL1YPL066W 1440 nt1.74□□□□□ -2.13
RPB9P27999 YJL181WYJL181W 1836 nt1.73□□□□□ -2.13
RPB9P27999 SVL3YPL032C 2478 nt1.73□□□□□ -2.13
RPB9P27999 RAV1YJR033C 4074 nt1.73□□□□□ -2.13
RPB9P27999 YDL025W-AYDL025W-A 105 nt1.73□□□□□ -2.13
RPB9P27999 YDR194W-AYDR194W-A 153 nt1.73□□□□□ -2.13
RPB9P27999 BNA7YDR428C 786 nt1.73□□□□□ -2.13
RPB9P27999 TIM9YEL020W-A 264 nt1.73□□□□□ -2.13
RPB9P27999 RPL16AYIL133C 600 nt1.73□□□□□ -2.13
RPB9P27999 PET191YJR034W 327 nt1.73□□□□□ -2.13
RPB9P27999 YJR140W-AYJR140W-A 150 nt1.73□□□□□ -2.13
RPB9P27999 YLR031WYLR031W 561 nt1.73□□□□□ -2.13
RPB9P27999 YNL010WYNL010W 726 nt1.73□□□□□ -2.13
RPB9P27999 GPI15YNL038W 690 nt1.73□□□□□ -2.13
RPB9P27999 RPS7BYNL096C 573 nt1.73□□□□□ -2.13
RPB9P27999 RGA2YDR379W 3030 nt1.73□□□□□ -2.13
RPB9P27999 GIP3YPL137C 3831 nt1.73□□□□□ -2.13
RPB9P27999 MZM1YDR493W 372 nt1.72□□□□□ -2.13
RPB9P27999 TIM8YJR135W-A 264 nt1.72□□□□□ -2.13
RPB9P27999 PAU8YAL068C 363 nt1.72□□□□□ -2.13
RPB9P27999 RMP1YLR145W 606 nt1.72□□□□□ -2.13
RPB9P27999 YNL122CYNL122C 348 nt1.72□□□□□ -2.13
RPB9P27999 PAU20YOL161C 363 nt1.72□□□□□ -2.13
RPB9P27999 VPS13YLL040C 9435 nt1.72□□□□□ -2.13
RPB9P27999 SOK2YMR016C 2358 nt1.71□□□□□ -2.14
RPB9P27999 MXR1YER042W 555 nt1.71□□□□□ -2.14
RPB9P27999 YPS5YGL259W 498 nt1.71□□□□□ -2.14
RPB9P27999 YAP3YHL009C 993 nt1.71□□□□□ -2.14
RPB9P27999 YJL127C-BYJL127C-B 159 nt1.71□□□□□ -2.14
RPB9P27999 YKL068W-AYKL068W-A 237 nt1.71□□□□□ -2.14
RPB9P27999 YLR202CYLR202C 327 nt1.71□□□□□ -2.14
RPB9P27999 YLR379WYLR379W 375 nt1.71□□□□□ -2.14
RPB9P27999 PKR1YMR123W 369 nt1.71□□□□□ -2.14
RPB9P27999 PBI2YNL015W 228 nt1.71□□□□□ -2.14
RPB9P27999 VMA9YCL005W-A 222 nt1.71□□□□□ -2.14
RPB9P27999 UBR1YGR184C 5853 nt1.71□□□□□ -2.14
RPB9P27999 PRK1YIL095W 2433 nt1.7□□□□□ -2.14
RPB9P27999 KIP1YBL063W 3336 nt1.7□□□□□ -2.14
RPB9P27999 CDC50YCR094W 1176 nt1.7□□□□□ -2.14
RPB9P27999 YDL068WYDL068W 330 nt1.7□□□□□ -2.14
RPB9P27999 DAD4YDR320C-A 219 nt1.7□□□□□ -2.14
RPB9P27999 RPL40AYIL148W 387 nt1.7□□□□□ -2.14
RPB9P27999 DDR48YMR173W 1293 nt1.7□□□□□ -2.14
RPB9P27999 ATP15YPL271W 189 nt1.7□□□□□ -2.14
RPB9P27999 IRC16YPR038W 360 nt1.7□□□□□ -2.14
RPB9P27999 TFC3YAL001C 3483 nt1.7□□□□□ -2.14
RPB9P27999 AFI1YOR129C 2682 nt1.69□□□□□ -2.14
RPB9P27999 RGA1YOR127W 3024 nt1.69□□□□□ -2.14
RPB9P27999 YJL052C-AYJL052C-A 120 nt1.69□□□□□ -2.14
RPB9P27999 YLR456WYLR456W 615 nt1.69□□□□□ -2.14
RPB9P27999 RPS17AYML024W 411 nt1.69□□□□□ -2.14
RPB9P27999 GAL7YBR018C 1101 nt1.69□□□□□ -2.14
RPB9P27999 YJL016WYJL016W 1686 nt1.68□□□□□ -2.14
RPB9P27999 SWR1YDR334W 4545 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 88.9 ms