Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 STXBP2-214ENST00000599400 811 ntTSL 515.88■□□□□ 0.136e-6■□□□□ 9.2
XRCC6P12956 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.123e-11■□□□□ 9.2
XRCC6P12956 TRIP10-205ENST00000596078 1010 ntTSL 514.71□□□□□ -0.056e-6■□□□□ 9.2
XRCC6P12956 PRMT1-207ENST00000527382 699 ntTSL 314.36□□□□□ -0.112e-7■□□□□ 9.2
XRCC6P12956 PRMT1-219ENST00000534465 779 ntTSL 314.36□□□□□ -0.112e-7■□□□□ 9.2
XRCC6P12956 PRMT1-211ENST00000528623 543 ntTSL 314.12□□□□□ -0.152e-7■□□□□ 9.2
XRCC6P12956 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.165e-10■□□□□ 9.2
XRCC6P12956 MSN-206ENST00000609672 568 ntTSL 414.02□□□□□ -0.176e-6■□□□□ 9.2
XRCC6P12956 STXBP2-219ENST00000600702 770 ntTSL 214□□□□□ -0.176e-6■□□□□ 9.2
XRCC6P12956 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.226e-6■□□□□ 9.2
XRCC6P12956 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.246e-6■□□□□ 9.2
XRCC6P12956 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.286e-6■□□□□ 9.2
XRCC6P12956 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.286e-6■□□□□ 9.2
XRCC6P12956 PTBP1-213ENST00000587191 357 ntTSL 512.98□□□□□ -0.335e-10■□□□□ 9.2
XRCC6P12956 PRMT1-212ENST00000529284 1182 ntTSL 512.86□□□□□ -0.352e-7■□□□□ 9.2
XRCC6P12956 PTBP1-205ENST00000585535 314 ntTSL 312.82□□□□□ -0.365e-10■□□□□ 9.2
XRCC6P12956 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC12.64□□□□□ -0.391e-8■□□□□ 9.2
XRCC6P12956 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.46e-6■□□□□ 9.2
XRCC6P12956 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.42e-7■□□□□ 9.2
XRCC6P12956 SEM1-205ENST00000444799 1590 ntTSL 2 BASIC12.47□□□□□ -0.415e-10■□□□□ 9.2
XRCC6P12956 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC12.44□□□□□ -0.426e-6■□□□□ 9.2
XRCC6P12956 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC12.39□□□□□ -0.436e-6■□□□□ 9.2
XRCC6P12956 SEM1-204ENST00000417009 350 ntTSL 3 BASIC12□□□□□ -0.495e-10■□□□□ 9.2
XRCC6P12956 MELTF-AS1-205ENST00000446695 204 ntTSL 311.72□□□□□ -0.536e-6■□□□□ 9.2
XRCC6P12956 PRMT1-206ENST00000526224 578 ntTSL 311.08□□□□□ -0.642e-7■□□□□ 9.2
XRCC6P12956 SEM1-206ENST00000449279 699 ntTSL 310.97□□□□□ -0.655e-10■□□□□ 9.2
XRCC6P12956 SEM1-210ENST00000488005 775 ntTSL 2 BASIC10.57□□□□□ -0.725e-10■□□□□ 9.2
XRCC6P12956 REPIN1-212ENST00000487455 464 ntTSL 410.23□□□□□ -0.776e-6■□□□□ 9.2
XRCC6P12956 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.786e-6■□□□□ 9.2
XRCC6P12956 SEM1-214ENST00000613919 610 ntTSL 210.12□□□□□ -0.795e-10■□□□□ 9.2
XRCC6P12956 SEM1-223ENST00000623498 582 ntTSL 5 BASIC9.97□□□□□ -0.815e-10■□□□□ 9.2
XRCC6P12956 PRMT1-208ENST00000527412 463 ntTSL 39.96□□□□□ -0.822e-7■□□□□ 9.2
XRCC6P12956 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.72□□□□□ -0.855e-10■□□□□ 9.2
XRCC6P12956 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.62□□□□□ -0.875e-10■□□□□ 9.2
XRCC6P12956 MELTF-AS1-203ENST00000424769 356 ntTSL 29.47□□□□□ -0.896e-6■□□□□ 9.2
XRCC6P12956 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.013e-11■□□□□ 9.2
XRCC6P12956 CDC42-205ENST00000498236 816 ntTSL 58.65□□□□□ -1.023e-11■□□□□ 9.2
XRCC6P12956 SEM1-207ENST00000466986 507 ntTSL 28.64□□□□□ -1.035e-10■□□□□ 9.2
XRCC6P12956 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.43□□□□□ -1.066e-6■□□□□ 9.2
XRCC6P12956 PTP4A1-202ENST00000470661 479 ntTSL 27.32□□□□□ -1.246e-6■□□□□ 9.2
XRCC6P12956 SEM1-217ENST00000617133 591 ntTSL 25.68□□□□□ -1.55e-10■□□□□ 9.2
XRCC6P12956 SEM1-219ENST00000618105 544 ntTSL 25.52□□□□□ -1.535e-10■□□□□ 9.2
XRCC6P12956 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.536e-6■□□□□ 9.2
XRCC6P12956 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.546e-6■□□□□ 9.2
XRCC6P12956 SEM1-220ENST00000619259 462 ntTSL 24.99□□□□□ -1.615e-10■□□□□ 9.2
XRCC6P12956 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.976e-6■□□□□ 9.2
XRCC6P12956 SEM1-209ENST00000482389 2773 ntTSL 22.45□□□□□ -2.025e-10■□□□□ 9.2
XRCC6P12956 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.59■■■□□ 2.011e-17■□□□□ 9.2
XRCC6P12956 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.2■□□□□ 0.181e-17■□□□□ 9.2
XRCC6P12956 RPL27A-203ENST00000525981 297 ntTSL 516.2■□□□□ 0.181e-17■□□□□ 9.2
XRCC6P12956 RPL27A-212ENST00000534599 651 ntTSL 514.67□□□□□ -0.061e-17■□□□□ 9.2
XRCC6P12956 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.081e-17■□□□□ 9.2
XRCC6P12956 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC12.99□□□□□ -0.331e-17■□□□□ 9.2
XRCC6P12956 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC12.12□□□□□ -0.471e-17■□□□□ 9.2
XRCC6P12956 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.2□□□□□ -1.11e-17■□□□□ 9.2
XRCC6P12956 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.47■■□□□ 1.194e-9■□□□□ 9.2
XRCC6P12956 MT-TT-201ENST00000387460 66 ntBASIC2.09□□□□□ -2.072e-20■□□□□ 9.2
XRCC6P12956 BCL6-210ENST00000496823 1138 ntTSL 315.52■□□□□ 0.083e-6■□□□□ 9.2
XRCC6P12956 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC15.36■□□□□ 0.053e-6■□□□□ 9.2
XRCC6P12956 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.213e-6■□□□□ 9.2
XRCC6P12956 BCL6-209ENST00000480458 342 ntTSL 59.32□□□□□ -0.923e-6■□□□□ 9.2
XRCC6P12956 BCL6-207ENST00000470319 526 ntTSL 43.22□□□□□ -1.893e-6■□□□□ 9.2
XRCC6P12956 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.332e-9■□□□□ 9.2
XRCC6P12956 SPN-205ENST00000563039 1853 ntTSL 522.57■■□□□ 1.22e-9■□□□□ 9.2
XRCC6P12956 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.292e-9■□□□□ 9.2
XRCC6P12956 HBM-202ENST00000472539 592 ntTSL 523.21■■□□□ 1.319e-39■□□□□ 9.1
XRCC6P12956 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.799e-39■□□□□ 9.1
XRCC6P12956 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.43■□□□□ 0.72e-8■□□□□ 9.1
XRCC6P12956 LRCH4-205ENST00000485554 774 ntTSL 319.68■□□□□ 0.745e-8■□□□□ 9.1
XRCC6P12956 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.018e-7■□□□□ 9.1
XRCC6P12956 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.978e-7■□□□□ 9.1
XRCC6P12956 RPS11-206ENST00000600027 944 ntTSL 513.27□□□□□ -0.294e-44■□□□□ 9.1
XRCC6P12956 RPS11-204ENST00000599167 1133 ntTSL 513.27□□□□□ -0.294e-44■□□□□ 9.1
XRCC6P12956 RPS11-207ENST00000601216 602 ntTSL 410.53□□□□□ -0.724e-44■□□□□ 9.1
XRCC6P12956 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.744e-44■□□□□ 9.1
XRCC6P12956 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.66□□□□□ -0.864e-44■□□□□ 9.1
XRCC6P12956 RPS11-209ENST00000602252 751 ntTSL 29.66□□□□□ -0.864e-44■□□□□ 9.1
XRCC6P12956 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.79□□□□□ -14e-44■□□□□ 9.1
XRCC6P12956 RPS11-208ENST00000601306 547 ntTSL 38.7□□□□□ -1.024e-44■□□□□ 9.1
XRCC6P12956 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.56□□□□□ -1.24e-44■□□□□ 9.1
XRCC6P12956 SNORD35B-201ENST00000363660 87 ntBASIC4.48□□□□□ -1.694e-44■□□□□ 9.1
XRCC6P12956 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.8■■□□□ 1.722e-11■□□□□ 9.1
XRCC6P12956 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.962e-11■□□□□ 9.1
XRCC6P12956 KLF3-202ENST00000482150 517 ntTSL 215.9■□□□□ 0.142e-11■□□□□ 9.1
XRCC6P12956 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.6■■■□□ 2.018e-21■□□□□ 9.1
XRCC6P12956 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.88e-21■□□□□ 9.1
XRCC6P12956 YWHAH-204ENST00000443669 822 ntTSL 325.6■■□□□ 1.698e-21■□□□□ 9.1
XRCC6P12956 YWHAH-206ENST00000479649 662 ntTSL 312.39□□□□□ -0.438e-21■□□□□ 9.1
XRCC6P12956 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.063e-10■□□□□ 9
XRCC6P12956 VEGFA-217ENST00000518538 535 ntTSL 224.56■■□□□ 1.523e-10■□□□□ 9
XRCC6P12956 ACTG1-204ENST00000571721 813 ntTSL 520.88■□□□□ 0.933e-10■□□□□ 9
XRCC6P12956 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.933e-10■□□□□ 9
XRCC6P12956 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.833e-10■□□□□ 9
XRCC6P12956 ACTG1-209ENST00000575659 742 ntTSL 318.85■□□□□ 0.613e-10■□□□□ 9
XRCC6P12956 NAP1L4-207ENST00000469805 2294 ntTSL 318.84■□□□□ 0.613e-10■□□□□ 9
XRCC6P12956 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.383e-10■□□□□ 9
XRCC6P12956 ACTG1-215ENST00000576917 1958 ntTSL 516.82■□□□□ 0.283e-10■□□□□ 9
XRCC6P12956 ACTG1-205ENST00000572105 1168 ntTSL 515.57■□□□□ 0.083e-10■□□□□ 9
XRCC6P12956 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.81□□□□□ -0.043e-10■□□□□ 9
XRCC6P12956 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.073e-10■□□□□ 9
Retrieved 100 of 6,788 protein–RNA pairs in 98.8 ms