Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 KAR9YPL269W 1935 nt1.76□□□□□ -2.13
RAD3P06839 RSM18YER050C 417 nt1.76□□□□□ -2.13
RAD3P06839 RPA34YJL148W 702 nt1.76□□□□□ -2.13
RAD3P06839 RAM2YKL019W 951 nt1.76□□□□□ -2.13
RAD3P06839 YPT6YLR262C 648 nt1.76□□□□□ -2.13
RAD3P06839 MRPL44YMR225C 297 nt1.76□□□□□ -2.13
RAD3P06839 NAN1YPL126W 2691 nt1.75□□□□□ -2.13
RAD3P06839 YDR341CYDR341C 1824 nt1.75□□□□□ -2.13
RAD3P06839 HOP2YGL033W 657 nt1.75□□□□□ -2.13
RAD3P06839 PRS3YHL011C 963 nt1.75□□□□□ -2.13
RAD3P06839 YJL086CYJL086C 369 nt1.75□□□□□ -2.13
RAD3P06839 HRI1YLR301W 735 nt1.75□□□□□ -2.13
RAD3P06839 SYH1YPL105C 2550 nt1.75□□□□□ -2.13
RAD3P06839 NCL1YBL024W 2055 nt1.75□□□□□ -2.13
RAD3P06839 HSL1YKL101W 4557 nt1.74□□□□□ -2.13
RAD3P06839 snR83snR83 306 nt1.74□□□□□ -2.13
RAD3P06839 YGL042CYGL042C 306 nt1.74□□□□□ -2.13
RAD3P06839 YGR115CYGR115C 780 nt1.74□□□□□ -2.13
RAD3P06839 YHL037CYHL037C 402 nt1.74□□□□□ -2.13
RAD3P06839 YJL119CYJL119C 324 nt1.74□□□□□ -2.13
RAD3P06839 TEN1YLR010C 483 nt1.74□□□□□ -2.13
RAD3P06839 TRS20YBR254C 528 nt1.74□□□□□ -2.13
RAD3P06839 snR59snR59 78 nt1.73□□□□□ -2.13
RAD3P06839 PBP4YDL053C 558 nt1.73□□□□□ -2.13
RAD3P06839 TSA2YDR453C 591 nt1.73□□□□□ -2.13
RAD3P06839 NOP10YHR072W-A 177 nt1.73□□□□□ -2.13
RAD3P06839 HYR1YIR037W 492 nt1.73□□□□□ -2.13
RAD3P06839 YJR023CYJR023C 402 nt1.73□□□□□ -2.13
RAD3P06839 PDP3YLR455W 915 nt1.73□□□□□ -2.13
RAD3P06839 YNL179CYNL179C 438 nt1.73□□□□□ -2.13
RAD3P06839 YNL319WYNL319W 441 nt1.73□□□□□ -2.13
RAD3P06839 TAZ1YPR140W 1146 nt1.73□□□□□ -2.13
RAD3P06839 GRR1YJR090C 3456 nt1.73□□□□□ -2.13
RAD3P06839 MYO4YAL029C 4416 nt1.72□□□□□ -2.13
RAD3P06839 YCR087C-AYCR087C-A 462 nt1.72□□□□□ -2.13
RAD3P06839 YGL024WYGL024W 336 nt1.72□□□□□ -2.13
RAD3P06839 YHR073W-AYHR073W-A 177 nt1.72□□□□□ -2.13
RAD3P06839 RPC25YKL144C 639 nt1.72□□□□□ -2.13
RAD3P06839 YLR458WYLR458W 381 nt1.72□□□□□ -2.13
RAD3P06839 LSM2YBL026W 288 nt1.72□□□□□ -2.13
RAD3P06839 LSM7YNL147W 348 nt1.72□□□□□ -2.13
RAD3P06839 YPR170CYPR170C 336 nt1.72□□□□□ -2.13
RAD3P06839 CHC1YGL206C 4962 nt1.72□□□□□ -2.13
RAD3P06839 NAM7YMR080C 2916 nt1.72□□□□□ -2.13
RAD3P06839 YDR286CYDR286C 345 nt1.71□□□□□ -2.14
RAD3P06839 VPS74YDR372C 1038 nt1.71□□□□□ -2.14
RAD3P06839 YGL014C-AYGL014C-A 162 nt1.71□□□□□ -2.14
RAD3P06839 YGL109WYGL109W 324 nt1.71□□□□□ -2.14
RAD3P06839 ACF4YJR083C 930 nt1.71□□□□□ -2.14
RAD3P06839 ERG29YMR134W 714 nt1.71□□□□□ -2.14
RAD3P06839 ATP20YPR020W 348 nt1.71□□□□□ -2.14
RAD3P06839 RPB5YBR154C 648 nt1.71□□□□□ -2.14
RAD3P06839 SPC72YAL047C 1869 nt1.71□□□□□ -2.14
RAD3P06839 PET309YLR067C 2898 nt1.7□□□□□ -2.14
RAD3P06839 GPM2YDL021W 936 nt1.7□□□□□ -2.14
RAD3P06839 YDL025W-AYDL025W-A 105 nt1.7□□□□□ -2.14
RAD3P06839 DAD1YDR016C 285 nt1.7□□□□□ -2.14
RAD3P06839 RPL40AYIL148W 387 nt1.7□□□□□ -2.14
RAD3P06839 YPL034WYPL034W 498 nt1.7□□□□□ -2.14
RAD3P06839 YPL238CYPL238C 390 nt1.7□□□□□ -2.14
RAD3P06839 YBP1YBR216C 2025 nt1.7□□□□□ -2.14
RAD3P06839 MGR1YCL044C 1254 nt1.7□□□□□ -2.14
RAD3P06839 NDD1YOR372C 1665 nt1.7□□□□□ -2.14
RAD3P06839 TRM3YDL112W 4311 nt1.69□□□□□ -2.14
RAD3P06839 CTF4YPR135W 2784 nt1.69□□□□□ -2.14
RAD3P06839 TDA2YER071C 381 nt1.69□□□□□ -2.14
RAD3P06839 PGD1YGL025C 1194 nt1.69□□□□□ -2.14
RAD3P06839 AIM18YHR198C 966 nt1.69□□□□□ -2.14
RAD3P06839 HHT2YNL031C 411 nt1.69□□□□□ -2.14
RAD3P06839 NUP192YJL039C 5052 nt1.69□□□□□ -2.14
RAD3P06839 SHE4YOR035C 2370 nt1.69□□□□□ -2.14
RAD3P06839 BFA1YJR053W 1725 nt1.69□□□□□ -2.14
RAD3P06839 CFT1YDR301W 4074 nt1.68□□□□□ -2.14
RAD3P06839 TDA9YML081W 3756 nt1.68□□□□□ -2.14
RAD3P06839 MND1YGL183C 660 nt1.68□□□□□ -2.14
RAD3P06839 TAD1YGL243W 1203 nt1.68□□□□□ -2.14
RAD3P06839 IST3YIR005W 447 nt1.68□□□□□ -2.14
RAD3P06839 TAP42YMR028W 1101 nt1.68□□□□□ -2.14
RAD3P06839 COA6YMR244C-A 315 nt1.68□□□□□ -2.14
RAD3P06839 OST2YOR103C 393 nt1.68□□□□□ -2.14
RAD3P06839 YCL002CYCL002C 792 nt1.68□□□□□ -2.14
RAD3P06839 PET127YOR017W 2403 nt1.68□□□□□ -2.14
RAD3P06839 BPH1YCR032W 6504 nt1.67□□□□□ -2.14
RAD3P06839 FIG2YCR089W 4830 nt1.67□□□□□ -2.14
RAD3P06839 SMD1YGR074W 441 nt1.67□□□□□ -2.14
RAD3P06839 YGR109W-AYGR109W-A 873 nt1.67□□□□□ -2.14
RAD3P06839 SDS22YKL193C 1017 nt1.67□□□□□ -2.14
RAD3P06839 YHC1YLR298C 696 nt1.67□□□□□ -2.14
RAD3P06839 YBL029C-AYBL029C-A 285 nt1.67□□□□□ -2.14
RAD3P06839 CSI1YMR025W 888 nt1.67□□□□□ -2.14
RAD3P06839 SAR1YPL218W 573 nt1.67□□□□□ -2.14
RAD3P06839 MMS22YLR320W 4365 nt1.67□□□□□ -2.14
RAD3P06839 VPS15YBR097W 4365 nt1.67□□□□□ -2.14
RAD3P06839 SOK2YMR016C 2358 nt1.66□□□□□ -2.14
RAD3P06839 SFB2YNL049C 2631 nt1.66□□□□□ -2.14
RAD3P06839 SPO22YIL073C 2928 nt1.66□□□□□ -2.14
RAD3P06839 snR5snR5 204 nt1.66□□□□□ -2.14
RAD3P06839 IRC2YDR112W 309 nt1.66□□□□□ -2.14
RAD3P06839 YFL012WYFL012W 447 nt1.66□□□□□ -2.14
RAD3P06839 FAR7YFR008W 666 nt1.66□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms