Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Gm11236J3QMS7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Gm6345-202ENSMUST00000180900 204 ntBASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11236J3QMS7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.59■□□□□ 0.57
Gm11236J3QMS7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Gm7367-201ENSMUST00000057611 492 ntBASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11236J3QMS7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm11236J3QMS7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm11236J3QMS7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm11236J3QMS7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm11236J3QMS7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm11236J3QMS7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11236J3QMS7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Gm9731-201ENSMUST00000209480 747 ntBASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11236J3QMS7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.56■□□□□ 0.56
Gm11236J3QMS7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.56■□□□□ 0.56
Gm11236J3QMS7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11236J3QMS7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms