Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
S4R3C0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
S4R3C0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
S4R3C0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
S4R3C0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
S4R3C0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
S4R3C0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
S4R3C0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.59■□□□□ 0.89
S4R3C0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
S4R3C0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
S4R3C0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.57■□□□□ 0.88
S4R3C0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S4R3C0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S4R3C0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S4R3C0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S4R3C0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
S4R3C0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
S4R3C0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
S4R3C0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
S4R3C0 AC010864.1-201ENST00000609407 1511 ntBASIC20.55■□□□□ 0.88
S4R3C0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
S4R3C0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
S4R3C0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
S4R3C0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.54■□□□□ 0.88
S4R3C0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
S4R3C0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.53■□□□□ 0.88
S4R3C0 MIR762-201ENST00000390236 83 ntBASIC20.53■□□□□ 0.88
S4R3C0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.53■□□□□ 0.88
S4R3C0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.53■□□□□ 0.88
S4R3C0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
S4R3C0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
S4R3C0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.52■□□□□ 0.88
S4R3C0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
S4R3C0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
S4R3C0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
S4R3C0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
S4R3C0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
S4R3C0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
S4R3C0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
S4R3C0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
S4R3C0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
S4R3C0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S4R3C0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S4R3C0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S4R3C0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S4R3C0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
S4R3C0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
S4R3C0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
S4R3C0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
S4R3C0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
S4R3C0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
S4R3C0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
S4R3C0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
S4R3C0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S4R3C0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
S4R3C0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
S4R3C0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.46■□□□□ 0.87
S4R3C0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S4R3C0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
S4R3C0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.45■□□□□ 0.86
S4R3C0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.45■□□□□ 0.86
S4R3C0 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.45■□□□□ 0.86
S4R3C0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.44■□□□□ 0.86
S4R3C0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
S4R3C0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.44■□□□□ 0.86
S4R3C0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
S4R3C0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
S4R3C0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.44■□□□□ 0.86
S4R3C0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
S4R3C0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
S4R3C0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
S4R3C0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
S4R3C0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
S4R3C0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
S4R3C0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
S4R3C0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.42■□□□□ 0.86
S4R3C0 AC005559.1-201ENST00000589661 871 ntBASIC20.42■□□□□ 0.86
S4R3C0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.42■□□□□ 0.86
S4R3C0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
S4R3C0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
S4R3C0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
S4R3C0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
S4R3C0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
S4R3C0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S4R3C0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
S4R3C0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
S4R3C0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
S4R3C0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
S4R3C0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
S4R3C0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.38■□□□□ 0.85
S4R3C0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
S4R3C0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
S4R3C0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
S4R3C0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
S4R3C0 AL139393.2-201ENST00000608721 2025 ntBASIC20.37■□□□□ 0.85
S4R3C0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
S4R3C0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
S4R3C0 DUX4L28-201ENST00000623687 678 ntBASIC20.36■□□□□ 0.85
S4R3C0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
S4R3C0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms