Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm5493S4R2D1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5493S4R2D1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5493S4R2D1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5493S4R2D1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5493S4R2D1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5493S4R2D1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5493S4R2D1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5493S4R2D1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.38■□□□□ 0.85
Gm5493S4R2D1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5493S4R2D1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5493S4R2D1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5493S4R2D1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Gm5493S4R2D1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gm5493S4R2D1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.33■□□□□ 0.85
Gm5493S4R2D1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5493S4R2D1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Gm5493S4R2D1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm5493S4R2D1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5493S4R2D1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5493S4R2D1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5493S4R2D1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5493S4R2D1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5493S4R2D1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5493S4R2D1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm5493S4R2D1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5493S4R2D1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5493S4R2D1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm5493S4R2D1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm5493S4R2D1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5493S4R2D1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5493S4R2D1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5493S4R2D1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm5493S4R2D1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gm5493S4R2D1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5493S4R2D1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Gm5493S4R2D1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5493S4R2D1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5493S4R2D1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm5493S4R2D1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5493S4R2D1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5493S4R2D1 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.25■□□□□ 0.83
Gm5493S4R2D1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5493S4R2D1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5493S4R2D1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.24■□□□□ 0.83
Gm5493S4R2D1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5493S4R2D1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5493S4R2D1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5493S4R2D1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5493S4R2D1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5493S4R2D1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5493S4R2D1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5493S4R2D1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5493S4R2D1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5493S4R2D1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5493S4R2D1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5493S4R2D1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5493S4R2D1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5493S4R2D1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5493S4R2D1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm5493S4R2D1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5493S4R2D1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5493S4R2D1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Gm5493S4R2D1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5493S4R2D1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5493S4R2D1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5493S4R2D1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Gm5493S4R2D1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5493S4R2D1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5493S4R2D1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm5493S4R2D1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5493S4R2D1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm5493S4R2D1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5493S4R2D1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5493S4R2D1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm5493S4R2D1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5493S4R2D1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5493S4R2D1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Gm5493S4R2D1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5493S4R2D1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5493S4R2D1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5493S4R2D1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5493S4R2D1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5493S4R2D1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms