Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nr1h3Q9Z0Y9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
Nr1h3Q9Z0Y9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nr1h3Q9Z0Y9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Nr1h3Q9Z0Y9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Nr1h3Q9Z0Y9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Nr1h3Q9Z0Y9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nr1h3Q9Z0Y9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.57■■□□□ 1.84
Nr1h3Q9Z0Y9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nr1h3Q9Z0Y9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1h3Q9Z0Y9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1h3Q9Z0Y9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.55■■□□□ 1.84
Nr1h3Q9Z0Y9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.55■■□□□ 1.84
Nr1h3Q9Z0Y9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1h3Q9Z0Y9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nr1h3Q9Z0Y9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.54■■□□□ 1.84
Nr1h3Q9Z0Y9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1h3Q9Z0Y9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1h3Q9Z0Y9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.53■■□□□ 1.84
Nr1h3Q9Z0Y9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1h3Q9Z0Y9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Nr1h3Q9Z0Y9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nr1h3Q9Z0Y9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nr1h3Q9Z0Y9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Nr1h3Q9Z0Y9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.49■■□□□ 1.83
Nr1h3Q9Z0Y9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nr1h3Q9Z0Y9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nr1h3Q9Z0Y9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Nr1h3Q9Z0Y9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Nr1h3Q9Z0Y9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Nr1h3Q9Z0Y9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nr1h3Q9Z0Y9 Gm11599-201ENSMUST00000118720 878 ntBASIC26.42■■□□□ 1.82
Nr1h3Q9Z0Y9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.42■■□□□ 1.82
Nr1h3Q9Z0Y9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nr1h3Q9Z0Y9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Nr1h3Q9Z0Y9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Nr1h3Q9Z0Y9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nr1h3Q9Z0Y9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.39■■□□□ 1.82
Nr1h3Q9Z0Y9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Nr1h3Q9Z0Y9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nr1h3Q9Z0Y9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nr1h3Q9Z0Y9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.37■■□□□ 1.81
Nr1h3Q9Z0Y9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Nr1h3Q9Z0Y9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nr1h3Q9Z0Y9 Zxda-201ENSMUST00000117281 2621 ntBASIC26.35■■□□□ 1.81
Nr1h3Q9Z0Y9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.35■■□□□ 1.81
Nr1h3Q9Z0Y9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Nr1h3Q9Z0Y9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nr1h3Q9Z0Y9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.34■■□□□ 1.81
Nr1h3Q9Z0Y9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nr1h3Q9Z0Y9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.32■■□□□ 1.8
Nr1h3Q9Z0Y9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nr1h3Q9Z0Y9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
Nr1h3Q9Z0Y9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nr1h3Q9Z0Y9 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.31■■□□□ 1.8
Nr1h3Q9Z0Y9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.31■■□□□ 1.8
Nr1h3Q9Z0Y9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nr1h3Q9Z0Y9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nr1h3Q9Z0Y9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Nr1h3Q9Z0Y9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1h3Q9Z0Y9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nr1h3Q9Z0Y9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nr1h3Q9Z0Y9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.27■■□□□ 1.8
Nr1h3Q9Z0Y9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nr1h3Q9Z0Y9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nr1h3Q9Z0Y9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nr1h3Q9Z0Y9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nr1h3Q9Z0Y9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nr1h3Q9Z0Y9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
Nr1h3Q9Z0Y9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Nr1h3Q9Z0Y9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Nr1h3Q9Z0Y9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nr1h3Q9Z0Y9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nr1h3Q9Z0Y9 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.24■■□□□ 1.79
Nr1h3Q9Z0Y9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Nr1h3Q9Z0Y9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Nr1h3Q9Z0Y9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nr1h3Q9Z0Y9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nr1h3Q9Z0Y9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nr1h3Q9Z0Y9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Nr1h3Q9Z0Y9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nr1h3Q9Z0Y9 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.22■■□□□ 1.79
Nr1h3Q9Z0Y9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nr1h3Q9Z0Y9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nr1h3Q9Z0Y9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nr1h3Q9Z0Y9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.18■■□□□ 1.78
Nr1h3Q9Z0Y9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.18■■□□□ 1.78
Nr1h3Q9Z0Y9 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.18■■□□□ 1.78
Nr1h3Q9Z0Y9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.17■■□□□ 1.78
Nr1h3Q9Z0Y9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.17■■□□□ 1.78
Nr1h3Q9Z0Y9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Nr1h3Q9Z0Y9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Nr1h3Q9Z0Y9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nr1h3Q9Z0Y9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.15■■□□□ 1.78
Nr1h3Q9Z0Y9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nr1h3Q9Z0Y9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.14■■□□□ 1.78
Nr1h3Q9Z0Y9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nr1h3Q9Z0Y9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.13■■□□□ 1.77
Nr1h3Q9Z0Y9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.12■■□□□ 1.77
Nr1h3Q9Z0Y9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms