Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cx3cr1Q9Z0D9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cx3cr1Q9Z0D9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cx3cr1Q9Z0D9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cx3cr1Q9Z0D9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cr1Q9Z0D9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Cx3cr1Q9Z0D9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cr1Q9Z0D9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cr1Q9Z0D9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cr1Q9Z0D9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
Cx3cr1Q9Z0D9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cx3cr1Q9Z0D9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cr1Q9Z0D9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.41■□□□□ 0.86
Cx3cr1Q9Z0D9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cr1Q9Z0D9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cr1Q9Z0D9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cx3cr1Q9Z0D9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.39■□□□□ 0.85
Cx3cr1Q9Z0D9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cx3cr1Q9Z0D9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.39■□□□□ 0.85
Cx3cr1Q9Z0D9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Cx3cr1Q9Z0D9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cr1Q9Z0D9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cx3cr1Q9Z0D9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cx3cr1Q9Z0D9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cx3cr1Q9Z0D9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cr1Q9Z0D9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cx3cr1Q9Z0D9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cr1Q9Z0D9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cr1Q9Z0D9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cr1Q9Z0D9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cr1Q9Z0D9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cr1Q9Z0D9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cx3cr1Q9Z0D9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cx3cr1Q9Z0D9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cx3cr1Q9Z0D9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cx3cr1Q9Z0D9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cx3cr1Q9Z0D9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cx3cr1Q9Z0D9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cx3cr1Q9Z0D9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cr1Q9Z0D9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cr1Q9Z0D9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cr1Q9Z0D9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cr1Q9Z0D9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cr1Q9Z0D9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cr1Q9Z0D9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cr1Q9Z0D9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cx3cr1Q9Z0D9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cx3cr1Q9Z0D9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cx3cr1Q9Z0D9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cx3cr1Q9Z0D9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cr1Q9Z0D9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Cx3cr1Q9Z0D9 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.27■□□□□ 0.83
Cx3cr1Q9Z0D9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.26■□□□□ 0.83
Cx3cr1Q9Z0D9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cx3cr1Q9Z0D9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cx3cr1Q9Z0D9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cx3cr1Q9Z0D9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cr1Q9Z0D9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cr1Q9Z0D9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cr1Q9Z0D9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cr1Q9Z0D9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cr1Q9Z0D9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cx3cr1Q9Z0D9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cr1Q9Z0D9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cr1Q9Z0D9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cr1Q9Z0D9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cx3cr1Q9Z0D9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cr1Q9Z0D9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cr1Q9Z0D9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cr1Q9Z0D9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cr1Q9Z0D9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cr1Q9Z0D9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cr1Q9Z0D9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.19■□□□□ 0.82
Cx3cr1Q9Z0D9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.19■□□□□ 0.82
Cx3cr1Q9Z0D9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cx3cr1Q9Z0D9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cr1Q9Z0D9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cr1Q9Z0D9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cx3cr1Q9Z0D9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.15■□□□□ 0.82
Cx3cr1Q9Z0D9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms