Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CSNK1G3Q9Y6M4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CSNK1G3Q9Y6M4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
CSNK1G3Q9Y6M4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSNK1G3Q9Y6M4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.88■■□□□ 1.73
CSNK1G3Q9Y6M4 AC016575.1-201ENST00000607026 382 ntBASIC25.87■■□□□ 1.73
CSNK1G3Q9Y6M4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSNK1G3Q9Y6M4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CSNK1G3Q9Y6M4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CSNK1G3Q9Y6M4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.86■■□□□ 1.73
CSNK1G3Q9Y6M4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSNK1G3Q9Y6M4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSNK1G3Q9Y6M4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSNK1G3Q9Y6M4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.84■■□□□ 1.73
CSNK1G3Q9Y6M4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSNK1G3Q9Y6M4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSNK1G3Q9Y6M4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.83■■□□□ 1.73
CSNK1G3Q9Y6M4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSNK1G3Q9Y6M4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 CR559946.2-201ENST00000623684 991 ntBASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSNK1G3Q9Y6M4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CSNK1G3Q9Y6M4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.8■■□□□ 1.72
CSNK1G3Q9Y6M4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSNK1G3Q9Y6M4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CSNK1G3Q9Y6M4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CSNK1G3Q9Y6M4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
CSNK1G3Q9Y6M4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.77■■□□□ 1.72
CSNK1G3Q9Y6M4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CSNK1G3Q9Y6M4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CSNK1G3Q9Y6M4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.76■■□□□ 1.71
CSNK1G3Q9Y6M4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CSNK1G3Q9Y6M4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CSNK1G3Q9Y6M4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.75■■□□□ 1.71
CSNK1G3Q9Y6M4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
CSNK1G3Q9Y6M4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CSNK1G3Q9Y6M4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CSNK1G3Q9Y6M4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CSNK1G3Q9Y6M4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CSNK1G3Q9Y6M4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CSNK1G3Q9Y6M4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.74■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L13-201ENST00000554103 1267 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L15-201ENST00000611059 1267 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L23-201ENST00000615195 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L24-201ENST00000617576 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L22-201ENST00000618238 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L20-201ENST00000619712 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L21-201ENST00000622058 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L10-201ENST00000622460 1267 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 DUX4L25-201ENST00000624915 1269 ntBASIC25.73■■□□□ 1.71
CSNK1G3Q9Y6M4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSNK1G3Q9Y6M4 AL161658.1-201ENST00000623641 1967 ntBASIC25.72■■□□□ 1.71
CSNK1G3Q9Y6M4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSNK1G3Q9Y6M4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSNK1G3Q9Y6M4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CSNK1G3Q9Y6M4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSNK1G3Q9Y6M4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CSNK1G3Q9Y6M4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
CSNK1G3Q9Y6M4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CSNK1G3Q9Y6M4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSNK1G3Q9Y6M4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSNK1G3Q9Y6M4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CSNK1G3Q9Y6M4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.68■■□□□ 1.7
CSNK1G3Q9Y6M4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G3Q9Y6M4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSNK1G3Q9Y6M4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CSNK1G3Q9Y6M4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSNK1G3Q9Y6M4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSNK1G3Q9Y6M4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CSNK1G3Q9Y6M4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.65■■□□□ 1.7
CSNK1G3Q9Y6M4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G3Q9Y6M4 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.64■■□□□ 1.7
CSNK1G3Q9Y6M4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.64■■□□□ 1.69
CSNK1G3Q9Y6M4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CSNK1G3Q9Y6M4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G3Q9Y6M4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.63■■□□□ 1.69
CSNK1G3Q9Y6M4 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.62■■□□□ 1.69
CSNK1G3Q9Y6M4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.62■■□□□ 1.69
CSNK1G3Q9Y6M4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G3Q9Y6M4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.6■■□□□ 1.69
CSNK1G3Q9Y6M4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.6■■□□□ 1.69
CSNK1G3Q9Y6M4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.6■■□□□ 1.69
CSNK1G3Q9Y6M4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSNK1G3Q9Y6M4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G3Q9Y6M4 AC010864.1-201ENST00000609407 1511 ntBASIC25.59■■□□□ 1.69
CSNK1G3Q9Y6M4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms