Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 HES6-205ENST00000409356 528 ntTSL 2 BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 GPX1-201ENST00000419349 1106 ntBASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.11■■■□□ 2.89
ARFGEF1Q9Y6D6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ARFGEF1Q9Y6D6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
ARFGEF1Q9Y6D6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
ARFGEF1Q9Y6D6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
ARFGEF1Q9Y6D6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ARFGEF1Q9Y6D6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.06■■■□□ 2.88
ARFGEF1Q9Y6D6 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ARFGEF1Q9Y6D6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
ARFGEF1Q9Y6D6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARFGEF1Q9Y6D6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARFGEF1Q9Y6D6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 AC012354.3-201ENST00000623734 483 ntBASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
ARFGEF1Q9Y6D6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.96■■■□□ 2.87
ARFGEF1Q9Y6D6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARFGEF1Q9Y6D6 NTF6A-201ENST00000591175 560 ntBASIC32.95■■■□□ 2.87
ARFGEF1Q9Y6D6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.95■■■□□ 2.86
ARFGEF1Q9Y6D6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
ARFGEF1Q9Y6D6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
ARFGEF1Q9Y6D6 RNF126P1-201ENST00000567452 1320 ntBASIC32.93■■■□□ 2.86
ARFGEF1Q9Y6D6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
ARFGEF1Q9Y6D6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.92■■■□□ 2.86
ARFGEF1Q9Y6D6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.91■■■□□ 2.86
ARFGEF1Q9Y6D6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ARFGEF1Q9Y6D6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ARFGEF1Q9Y6D6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
ARFGEF1Q9Y6D6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ARFGEF1Q9Y6D6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ARFGEF1Q9Y6D6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
ARFGEF1Q9Y6D6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.8■■■□□ 2.84
ARFGEF1Q9Y6D6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.76■■■□□ 2.83
ARFGEF1Q9Y6D6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.75■■■□□ 2.83
ARFGEF1Q9Y6D6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
ARFGEF1Q9Y6D6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.71■■■□□ 2.83
ARFGEF1Q9Y6D6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.7■■■□□ 2.83
ARFGEF1Q9Y6D6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ARFGEF1Q9Y6D6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ARFGEF1Q9Y6D6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 LINC00273-201ENST00000539813 1452 ntBASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 AC008813.1-201ENST00000536597 885 ntBASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms