Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CYP46A1Q9Y6A2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CYP46A1Q9Y6A2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CYP46A1Q9Y6A2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.22■■■□□ 2.59
CYP46A1Q9Y6A2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CYP46A1Q9Y6A2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CYP46A1Q9Y6A2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CYP46A1Q9Y6A2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CYP46A1Q9Y6A2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.2■■■□□ 2.58
CYP46A1Q9Y6A2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CYP46A1Q9Y6A2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.19■■■□□ 2.58
CYP46A1Q9Y6A2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CYP46A1Q9Y6A2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CYP46A1Q9Y6A2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.18■■■□□ 2.58
CYP46A1Q9Y6A2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
CYP46A1Q9Y6A2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CYP46A1Q9Y6A2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CYP46A1Q9Y6A2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CYP46A1Q9Y6A2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CYP46A1Q9Y6A2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.14■■■□□ 2.58
CYP46A1Q9Y6A2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.14■■■□□ 2.58
CYP46A1Q9Y6A2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CYP46A1Q9Y6A2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CYP46A1Q9Y6A2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CYP46A1Q9Y6A2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CYP46A1Q9Y6A2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CYP46A1Q9Y6A2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CYP46A1Q9Y6A2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CYP46A1Q9Y6A2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CYP46A1Q9Y6A2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.09■■■□□ 2.57
CYP46A1Q9Y6A2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CYP46A1Q9Y6A2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CYP46A1Q9Y6A2 AL139393.2-201ENST00000608721 2025 ntBASIC31.08■■■□□ 2.57
CYP46A1Q9Y6A2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
CYP46A1Q9Y6A2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CYP46A1Q9Y6A2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CYP46A1Q9Y6A2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.04■■■□□ 2.56
CYP46A1Q9Y6A2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.04■■■□□ 2.56
CYP46A1Q9Y6A2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CYP46A1Q9Y6A2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.02■■■□□ 2.56
CYP46A1Q9Y6A2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CYP46A1Q9Y6A2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CYP46A1Q9Y6A2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CYP46A1Q9Y6A2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CYP46A1Q9Y6A2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CYP46A1Q9Y6A2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.99■■■□□ 2.55
CYP46A1Q9Y6A2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CYP46A1Q9Y6A2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CYP46A1Q9Y6A2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CYP46A1Q9Y6A2 MIR762-201ENST00000390236 83 ntBASIC30.97■■■□□ 2.55
CYP46A1Q9Y6A2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.97■■■□□ 2.55
CYP46A1Q9Y6A2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.97■■■□□ 2.55
CYP46A1Q9Y6A2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CYP46A1Q9Y6A2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
CYP46A1Q9Y6A2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CYP46A1Q9Y6A2 SUZ12P1-203ENST00000578195 985 ntBASIC30.96■■■□□ 2.55
CYP46A1Q9Y6A2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CYP46A1Q9Y6A2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
CYP46A1Q9Y6A2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
CYP46A1Q9Y6A2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CYP46A1Q9Y6A2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.95■■■□□ 2.54
CYP46A1Q9Y6A2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CYP46A1Q9Y6A2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.93■■■□□ 2.54
CYP46A1Q9Y6A2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
CYP46A1Q9Y6A2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
CYP46A1Q9Y6A2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CYP46A1Q9Y6A2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CYP46A1Q9Y6A2 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.92■■■□□ 2.54
CYP46A1Q9Y6A2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
CYP46A1Q9Y6A2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.91■■■□□ 2.54
CYP46A1Q9Y6A2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.91■■■□□ 2.54
CYP46A1Q9Y6A2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CYP46A1Q9Y6A2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CYP46A1Q9Y6A2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.88■■■□□ 2.53
CYP46A1Q9Y6A2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CYP46A1Q9Y6A2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
CYP46A1Q9Y6A2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CYP46A1Q9Y6A2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CYP46A1Q9Y6A2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
CYP46A1Q9Y6A2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CYP46A1Q9Y6A2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CYP46A1Q9Y6A2 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.81■■■□□ 2.52
CYP46A1Q9Y6A2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CYP46A1Q9Y6A2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CYP46A1Q9Y6A2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CYP46A1Q9Y6A2 AC127502.1-201ENST00000399971 1502 ntBASIC30.79■■■□□ 2.52
CYP46A1Q9Y6A2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CYP46A1Q9Y6A2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.79■■■□□ 2.52
CYP46A1Q9Y6A2 AC005559.1-201ENST00000589661 871 ntBASIC30.78■■■□□ 2.52
CYP46A1Q9Y6A2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
CYP46A1Q9Y6A2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CYP46A1Q9Y6A2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.77■■■□□ 2.52
CYP46A1Q9Y6A2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CYP46A1Q9Y6A2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms