Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA9Q9Y5H5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA9Q9Y5H5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHA9Q9Y5H5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
PCDHA9Q9Y5H5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA9Q9Y5H5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA9Q9Y5H5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA9Q9Y5H5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHA9Q9Y5H5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA9Q9Y5H5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA9Q9Y5H5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PCDHA9Q9Y5H5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
PCDHA9Q9Y5H5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA9Q9Y5H5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHA9Q9Y5H5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHA9Q9Y5H5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
PCDHA9Q9Y5H5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHA9Q9Y5H5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA9Q9Y5H5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHA9Q9Y5H5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA9Q9Y5H5 AC142086.6-201ENST00000621154 1765 ntBASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA9Q9Y5H5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PCDHA9Q9Y5H5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA9Q9Y5H5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PCDHA9Q9Y5H5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA9Q9Y5H5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA9Q9Y5H5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA9Q9Y5H5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA9Q9Y5H5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA9Q9Y5H5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA9Q9Y5H5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHA9Q9Y5H5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA9Q9Y5H5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA9Q9Y5H5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA9Q9Y5H5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA9Q9Y5H5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA9Q9Y5H5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA9Q9Y5H5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA9Q9Y5H5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA9Q9Y5H5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA9Q9Y5H5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDHA9Q9Y5H5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA9Q9Y5H5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHA9Q9Y5H5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDHA9Q9Y5H5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA9Q9Y5H5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA9Q9Y5H5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PCDHA9Q9Y5H5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA9Q9Y5H5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA9Q9Y5H5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA9Q9Y5H5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
PCDHA9Q9Y5H5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA9Q9Y5H5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA9Q9Y5H5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA9Q9Y5H5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA9Q9Y5H5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA9Q9Y5H5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA9Q9Y5H5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA9Q9Y5H5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA9Q9Y5H5 SUZ12P1-203ENST00000578195 985 ntBASIC25.06■■□□□ 1.6
PCDHA9Q9Y5H5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA9Q9Y5H5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA9Q9Y5H5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA9Q9Y5H5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA9Q9Y5H5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA9Q9Y5H5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA9Q9Y5H5 AL139393.2-201ENST00000608721 2025 ntBASIC25.04■■□□□ 1.6
PCDHA9Q9Y5H5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA9Q9Y5H5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PCDHA9Q9Y5H5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA9Q9Y5H5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA9Q9Y5H5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA9Q9Y5H5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHA9Q9Y5H5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA9Q9Y5H5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA9Q9Y5H5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHA9Q9Y5H5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA9Q9Y5H5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
PCDHA9Q9Y5H5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA9Q9Y5H5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
PCDHA9Q9Y5H5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA9Q9Y5H5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
PCDHA9Q9Y5H5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
PCDHA9Q9Y5H5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHA9Q9Y5H5 DRD5P2-201ENST00000421395 2012 ntBASIC24.96■■□□□ 1.59
PCDHA9Q9Y5H5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA9Q9Y5H5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA9Q9Y5H5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA9Q9Y5H5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA9Q9Y5H5 MIR762-201ENST00000390236 83 ntBASIC24.95■■□□□ 1.58
PCDHA9Q9Y5H5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
PCDHA9Q9Y5H5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHA9Q9Y5H5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA9Q9Y5H5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms