Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.28■■■□□ 2.44
PCDHA6Q9UN73 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHA6Q9UN73 ST7-AS1-201ENST00000456775 1889 ntBASIC30.27■■■□□ 2.44
PCDHA6Q9UN73 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHA6Q9UN73 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCDHA6Q9UN73 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
PCDHA6Q9UN73 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.25■■■□□ 2.43
PCDHA6Q9UN73 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
PCDHA6Q9UN73 ABCB10P1-201ENST00000614297 2181 ntBASIC30.24■■■□□ 2.43
PCDHA6Q9UN73 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHA6Q9UN73 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 AC010864.1-201ENST00000609407 1511 ntBASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA6Q9UN73 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHA6Q9UN73 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
PCDHA6Q9UN73 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.22■■■□□ 2.43
PCDHA6Q9UN73 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCDHA6Q9UN73 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCDHA6Q9UN73 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.21■■■□□ 2.43
PCDHA6Q9UN73 MIR6090-201ENST00000622481 60 ntBASIC30.21■■■□□ 2.43
PCDHA6Q9UN73 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCDHA6Q9UN73 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.2■■■□□ 2.43
PCDHA6Q9UN73 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
PCDHA6Q9UN73 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.2■■■□□ 2.42
PCDHA6Q9UN73 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCDHA6Q9UN73 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.42
PCDHA6Q9UN73 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHA6Q9UN73 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.19■■■□□ 2.42
PCDHA6Q9UN73 AC108673.1-201ENST00000510422 1159 ntBASIC30.19■■■□□ 2.42
PCDHA6Q9UN73 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHA6Q9UN73 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHA6Q9UN73 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
PCDHA6Q9UN73 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHA6Q9UN73 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHA6Q9UN73 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.14■■■□□ 2.42
PCDHA6Q9UN73 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHA6Q9UN73 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHA6Q9UN73 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHA6Q9UN73 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHA6Q9UN73 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHA6Q9UN73 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHA6Q9UN73 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHA6Q9UN73 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHA6Q9UN73 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.09■■■□□ 2.41
PCDHA6Q9UN73 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.08■■■□□ 2.41
PCDHA6Q9UN73 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
PCDHA6Q9UN73 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
PCDHA6Q9UN73 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
PCDHA6Q9UN73 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.07■■■□□ 2.4
PCDHA6Q9UN73 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.07■■■□□ 2.4
PCDHA6Q9UN73 ABHD17AP4-201ENST00000411545 909 ntBASIC30.06■■■□□ 2.4
PCDHA6Q9UN73 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHA6Q9UN73 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.05■■■□□ 2.4
PCDHA6Q9UN73 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHA6Q9UN73 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.04■■■□□ 2.4
PCDHA6Q9UN73 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.04■■■□□ 2.4
PCDHA6Q9UN73 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.04■■■□□ 2.4
PCDHA6Q9UN73 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.04■■■□□ 2.4
PCDHA6Q9UN73 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHA6Q9UN73 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDHA6Q9UN73 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.03■■■□□ 2.4
PCDHA6Q9UN73 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHA6Q9UN73 DUX4L29-201ENST00000425409 679 ntBASIC30.02■■■□□ 2.4
PCDHA6Q9UN73 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.02■■■□□ 2.4
PCDHA6Q9UN73 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHA6Q9UN73 AC021231.2-201ENST00000594613 730 ntBASIC30.01■■■□□ 2.39
PCDHA6Q9UN73 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCDHA6Q9UN73 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30■■■□□ 2.39
PCDHA6Q9UN73 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
PCDHA6Q9UN73 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.98■■■□□ 2.39
PCDHA6Q9UN73 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA6Q9UN73 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA6Q9UN73 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA6Q9UN73 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA6Q9UN73 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA6Q9UN73 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PCDHA6Q9UN73 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PCDHA6Q9UN73 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PCDHA6Q9UN73 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
PCDHA6Q9UN73 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCDHA6Q9UN73 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHA6Q9UN73 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHA6Q9UN73 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHA6Q9UN73 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHA6Q9UN73 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHA6Q9UN73 ZNRF2P2-203ENST00000454624 420 ntBASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms