Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42SE1Q9NRR8 LINC00543-201ENST00000567234 1845 ntBASIC13.82□□□□□ -0.2
CDC42SE1Q9NRR8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42SE1Q9NRR8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42SE1Q9NRR8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDC42SE1Q9NRR8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDC42SE1Q9NRR8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE1Q9NRR8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC13.8□□□□□ -0.2
CDC42SE1Q9NRR8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDC42SE1Q9NRR8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC42SE1Q9NRR8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE1Q9NRR8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDC42SE1Q9NRR8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42SE1Q9NRR8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE1Q9NRR8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE1Q9NRR8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDC42SE1Q9NRR8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE1Q9NRR8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42SE1Q9NRR8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE1Q9NRR8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CDC42SE1Q9NRR8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE1Q9NRR8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.75□□□□□ -0.21
CDC42SE1Q9NRR8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE1Q9NRR8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE1Q9NRR8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE1Q9NRR8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE1Q9NRR8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CDC42SE1Q9NRR8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE1Q9NRR8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42SE1Q9NRR8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE1Q9NRR8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE1Q9NRR8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE1Q9NRR8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE1Q9NRR8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE1Q9NRR8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CDC42SE1Q9NRR8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE1Q9NRR8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE1Q9NRR8 AC093323.1-202ENST00000635031 2045 ntBASIC13.69□□□□□ -0.22
CDC42SE1Q9NRR8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE1Q9NRR8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDC42SE1Q9NRR8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE1Q9NRR8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDC42SE1Q9NRR8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDC42SE1Q9NRR8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.68□□□□□ -0.22
CDC42SE1Q9NRR8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC42SE1Q9NRR8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42SE1Q9NRR8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE1Q9NRR8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 CLDN5-201ENST00000403084 2357 ntBASIC13.64□□□□□ -0.23
CDC42SE1Q9NRR8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE1Q9NRR8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms