Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Ssna1Q9JJ94 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssna1Q9JJ94 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssna1Q9JJ94 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ssna1Q9JJ94 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssna1Q9JJ94 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssna1Q9JJ94 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssna1Q9JJ94 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssna1Q9JJ94 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssna1Q9JJ94 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssna1Q9JJ94 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssna1Q9JJ94 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssna1Q9JJ94 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssna1Q9JJ94 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssna1Q9JJ94 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssna1Q9JJ94 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ssna1Q9JJ94 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssna1Q9JJ94 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssna1Q9JJ94 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.74■□□□□ 0.75
Ssna1Q9JJ94 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ssna1Q9JJ94 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssna1Q9JJ94 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssna1Q9JJ94 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssna1Q9JJ94 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ssna1Q9JJ94 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ssna1Q9JJ94 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.72■□□□□ 0.75
Ssna1Q9JJ94 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ssna1Q9JJ94 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ssna1Q9JJ94 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssna1Q9JJ94 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ssna1Q9JJ94 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssna1Q9JJ94 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ssna1Q9JJ94 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssna1Q9JJ94 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssna1Q9JJ94 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssna1Q9JJ94 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ssna1Q9JJ94 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssna1Q9JJ94 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssna1Q9JJ94 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ssna1Q9JJ94 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ssna1Q9JJ94 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssna1Q9JJ94 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ssna1Q9JJ94 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ssna1Q9JJ94 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssna1Q9JJ94 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssna1Q9JJ94 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssna1Q9JJ94 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssna1Q9JJ94 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssna1Q9JJ94 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssna1Q9JJ94 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.65■□□□□ 0.74
Ssna1Q9JJ94 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssna1Q9JJ94 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssna1Q9JJ94 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssna1Q9JJ94 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssna1Q9JJ94 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ssna1Q9JJ94 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssna1Q9JJ94 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssna1Q9JJ94 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 Gm27325-201ENSMUST00000175467 74 ntBASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssna1Q9JJ94 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssna1Q9JJ94 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssna1Q9JJ94 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ssna1Q9JJ94 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssna1Q9JJ94 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.59■□□□□ 0.73
Ssna1Q9JJ94 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ssna1Q9JJ94 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssna1Q9JJ94 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.58■□□□□ 0.73
Ssna1Q9JJ94 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ssna1Q9JJ94 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ssna1Q9JJ94 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssna1Q9JJ94 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssna1Q9JJ94 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ssna1Q9JJ94 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssna1Q9JJ94 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.57■□□□□ 0.72
Ssna1Q9JJ94 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.57■□□□□ 0.72
Ssna1Q9JJ94 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssna1Q9JJ94 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssna1Q9JJ94 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ssna1Q9JJ94 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssna1Q9JJ94 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms