Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
BRD9Q9H8M2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
BRD9Q9H8M2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
BRD9Q9H8M2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.41■■□□□ 1.98
BRD9Q9H8M2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.39■■□□□ 1.98
BRD9Q9H8M2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
BRD9Q9H8M2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
BRD9Q9H8M2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.38■■□□□ 1.97
BRD9Q9H8M2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BRD9Q9H8M2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BRD9Q9H8M2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BRD9Q9H8M2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.37■■□□□ 1.97
BRD9Q9H8M2 AC120057.4-201ENST00000624722 1615 ntBASIC27.37■■□□□ 1.97
BRD9Q9H8M2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.36■■□□□ 1.97
BRD9Q9H8M2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.36■■□□□ 1.97
BRD9Q9H8M2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD9Q9H8M2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BRD9Q9H8M2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD9Q9H8M2 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.35■■□□□ 1.97
BRD9Q9H8M2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD9Q9H8M2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.33■■□□□ 1.97
BRD9Q9H8M2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.33■■□□□ 1.97
BRD9Q9H8M2 DUX4L13-201ENST00000554103 1267 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L15-201ENST00000611059 1267 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L23-201ENST00000615195 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L24-201ENST00000617576 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L22-201ENST00000618238 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L20-201ENST00000619712 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L21-201ENST00000622058 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L10-201ENST00000622460 1267 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 DUX4L25-201ENST00000624915 1269 ntBASIC27.32■■□□□ 1.96
BRD9Q9H8M2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
BRD9Q9H8M2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.32■■□□□ 1.96
BRD9Q9H8M2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD9Q9H8M2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.31■■□□□ 1.96
BRD9Q9H8M2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD9Q9H8M2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
BRD9Q9H8M2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
BRD9Q9H8M2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
BRD9Q9H8M2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.29■■□□□ 1.96
BRD9Q9H8M2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BRD9Q9H8M2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.28■■□□□ 1.96
BRD9Q9H8M2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD9Q9H8M2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BRD9Q9H8M2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.27■■□□□ 1.96
BRD9Q9H8M2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.27■■□□□ 1.96
BRD9Q9H8M2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
BRD9Q9H8M2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BRD9Q9H8M2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD9Q9H8M2 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.26■■□□□ 1.95
BRD9Q9H8M2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD9Q9H8M2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD9Q9H8M2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD9Q9H8M2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD9Q9H8M2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD9Q9H8M2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.24■■□□□ 1.95
BRD9Q9H8M2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.23■■□□□ 1.95
BRD9Q9H8M2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
BRD9Q9H8M2 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.22■■□□□ 1.95
BRD9Q9H8M2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
BRD9Q9H8M2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
BRD9Q9H8M2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
BRD9Q9H8M2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
BRD9Q9H8M2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
BRD9Q9H8M2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
BRD9Q9H8M2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
BRD9Q9H8M2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
BRD9Q9H8M2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.16■■□□□ 1.94
BRD9Q9H8M2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BRD9Q9H8M2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BRD9Q9H8M2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.16■■□□□ 1.94
BRD9Q9H8M2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.16■■□□□ 1.94
BRD9Q9H8M2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD9Q9H8M2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD9Q9H8M2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
BRD9Q9H8M2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
BRD9Q9H8M2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.12■■□□□ 1.93
BRD9Q9H8M2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BRD9Q9H8M2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.12■■□□□ 1.93
BRD9Q9H8M2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BRD9Q9H8M2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD9Q9H8M2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.11■■□□□ 1.93
BRD9Q9H8M2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.11■■□□□ 1.93
BRD9Q9H8M2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BRD9Q9H8M2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BRD9Q9H8M2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BRD9Q9H8M2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
BRD9Q9H8M2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BRD9Q9H8M2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms