Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
ZSWIM4Q9H7M6 ABCB10P1-201ENST00000614297 2181 ntBASIC29.64■■■□□ 2.34
ZSWIM4Q9H7M6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ZSWIM4Q9H7M6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ZSWIM4Q9H7M6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ZSWIM4Q9H7M6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ZSWIM4Q9H7M6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ZSWIM4Q9H7M6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
ZSWIM4Q9H7M6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ZSWIM4Q9H7M6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ZSWIM4Q9H7M6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
ZSWIM4Q9H7M6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
ZSWIM4Q9H7M6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
ZSWIM4Q9H7M6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.58■■■□□ 2.33
ZSWIM4Q9H7M6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
ZSWIM4Q9H7M6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZSWIM4Q9H7M6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZSWIM4Q9H7M6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.54■■■□□ 2.32
ZSWIM4Q9H7M6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZSWIM4Q9H7M6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.53■■■□□ 2.32
ZSWIM4Q9H7M6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZSWIM4Q9H7M6 AC108673.1-201ENST00000510422 1159 ntBASIC29.53■■■□□ 2.32
ZSWIM4Q9H7M6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
ZSWIM4Q9H7M6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.52■■■□□ 2.32
ZSWIM4Q9H7M6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
ZSWIM4Q9H7M6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZSWIM4Q9H7M6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ZSWIM4Q9H7M6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ZSWIM4Q9H7M6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZSWIM4Q9H7M6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.5■■■□□ 2.31
ZSWIM4Q9H7M6 AL135925.1-201ENST00000605920 1701 ntBASIC29.5■■■□□ 2.31
ZSWIM4Q9H7M6 AC010864.1-201ENST00000609407 1511 ntBASIC29.49■■■□□ 2.31
ZSWIM4Q9H7M6 MIR6090-201ENST00000622481 60 ntBASIC29.48■■■□□ 2.31
ZSWIM4Q9H7M6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZSWIM4Q9H7M6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZSWIM4Q9H7M6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZSWIM4Q9H7M6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZSWIM4Q9H7M6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
ZSWIM4Q9H7M6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZSWIM4Q9H7M6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZSWIM4Q9H7M6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.45■■■□□ 2.31
ZSWIM4Q9H7M6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.45■■■□□ 2.3
ZSWIM4Q9H7M6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
ZSWIM4Q9H7M6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZSWIM4Q9H7M6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZSWIM4Q9H7M6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.44■■■□□ 2.3
ZSWIM4Q9H7M6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ZSWIM4Q9H7M6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
ZSWIM4Q9H7M6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.41■■■□□ 2.3
ZSWIM4Q9H7M6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 ABCB10P3-201ENST00000561950 2166 ntBASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ZSWIM4Q9H7M6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ZSWIM4Q9H7M6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.39■■■□□ 2.3
ZSWIM4Q9H7M6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ZSWIM4Q9H7M6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZSWIM4Q9H7M6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.37■■■□□ 2.29
ZSWIM4Q9H7M6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.37■■■□□ 2.29
ZSWIM4Q9H7M6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.36■■■□□ 2.29
ZSWIM4Q9H7M6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.36■■■□□ 2.29
ZSWIM4Q9H7M6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZSWIM4Q9H7M6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZSWIM4Q9H7M6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.35■■■□□ 2.29
ZSWIM4Q9H7M6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ZSWIM4Q9H7M6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZSWIM4Q9H7M6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
ZSWIM4Q9H7M6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZSWIM4Q9H7M6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.33■■■□□ 2.29
ZSWIM4Q9H7M6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZSWIM4Q9H7M6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZSWIM4Q9H7M6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.31■■■□□ 2.28
ZSWIM4Q9H7M6 ST7-AS1-201ENST00000456775 1889 ntBASIC29.31■■■□□ 2.28
ZSWIM4Q9H7M6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZSWIM4Q9H7M6 DUX4L29-201ENST00000425409 679 ntBASIC29.3■■■□□ 2.28
ZSWIM4Q9H7M6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ZSWIM4Q9H7M6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
ZSWIM4Q9H7M6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.28■■■□□ 2.28
ZSWIM4Q9H7M6 AC021231.2-201ENST00000594613 730 ntBASIC29.27■■■□□ 2.28
ZSWIM4Q9H7M6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ZSWIM4Q9H7M6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.28
ZSWIM4Q9H7M6 AC139426.1-201ENST00000568218 2529 ntBASIC29.26■■■□□ 2.27
ZSWIM4Q9H7M6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ZSWIM4Q9H7M6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms