Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 LINC01971-201ENST00000617888 1048 ntBASIC30.91■■■□□ 2.54
SH2D4AQ9H788 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.88■■■□□ 2.53
SH2D4AQ9H788 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SH2D4AQ9H788 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SH2D4AQ9H788 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.85■■■□□ 2.53
SH2D4AQ9H788 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SH2D4AQ9H788 DUX4L11-201ENST00000611504 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 DUX4L12-201ENST00000614593 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 DUX4L14-201ENST00000621227 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SH2D4AQ9H788 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.81■■■□□ 2.52
SH2D4AQ9H788 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SH2D4AQ9H788 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SH2D4AQ9H788 MIR639-201ENST00000384974 98 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.78■■■□□ 2.52
SH2D4AQ9H788 MIR3648-2-201ENST00000581792 180 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 MIR3648-1-201ENST00000615959 180 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SH2D4AQ9H788 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.77■■■□□ 2.52
SH2D4AQ9H788 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.76■■■□□ 2.51
SH2D4AQ9H788 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.76■■■□□ 2.51
SH2D4AQ9H788 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 AC016575.1-201ENST00000607026 382 ntBASIC30.73■■■□□ 2.51
SH2D4AQ9H788 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.71■■■□□ 2.51
SH2D4AQ9H788 MIR4449-201ENST00000578365 66 ntBASIC30.71■■■□□ 2.51
SH2D4AQ9H788 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH2D4AQ9H788 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH2D4AQ9H788 CR559946.2-201ENST00000623684 991 ntBASIC30.7■■■□□ 2.51
SH2D4AQ9H788 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
SH2D4AQ9H788 AC010864.1-201ENST00000609407 1511 ntBASIC30.69■■■□□ 2.5
SH2D4AQ9H788 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SH2D4AQ9H788 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
SH2D4AQ9H788 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 DUX4L13-201ENST00000554103 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L15-201ENST00000611059 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L23-201ENST00000615195 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L24-201ENST00000617576 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L22-201ENST00000618238 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L20-201ENST00000619712 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L21-201ENST00000622058 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L10-201ENST00000622460 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L25-201ENST00000624915 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SH2D4AQ9H788 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SH2D4AQ9H788 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SH2D4AQ9H788 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SH2D4AQ9H788 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH2D4AQ9H788 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH2D4AQ9H788 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms