Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RPAP3Q9H6T3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPAP3Q9H6T3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPAP3Q9H6T3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPAP3Q9H6T3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RPAP3Q9H6T3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
RPAP3Q9H6T3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.76■■■□□ 2.51
RPAP3Q9H6T3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.76■■■□□ 2.51
RPAP3Q9H6T3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.76■■■□□ 2.51
RPAP3Q9H6T3 AL161658.1-201ENST00000623641 1967 ntBASIC30.75■■■□□ 2.51
RPAP3Q9H6T3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.75■■■□□ 2.51
RPAP3Q9H6T3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RPAP3Q9H6T3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RPAP3Q9H6T3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPAP3Q9H6T3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
RPAP3Q9H6T3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.73■■■□□ 2.51
RPAP3Q9H6T3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RPAP3Q9H6T3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RPAP3Q9H6T3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RPAP3Q9H6T3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.7■■■□□ 2.51
RPAP3Q9H6T3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RPAP3Q9H6T3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RPAP3Q9H6T3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.69■■■□□ 2.5
RPAP3Q9H6T3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.69■■■□□ 2.5
RPAP3Q9H6T3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RPAP3Q9H6T3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RPAP3Q9H6T3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP3Q9H6T3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP3Q9H6T3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RPAP3Q9H6T3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RPAP3Q9H6T3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.65■■■□□ 2.5
RPAP3Q9H6T3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RPAP3Q9H6T3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.65■■■□□ 2.5
RPAP3Q9H6T3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.65■■■□□ 2.5
RPAP3Q9H6T3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RPAP3Q9H6T3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RPAP3Q9H6T3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.64■■■□□ 2.5
RPAP3Q9H6T3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RPAP3Q9H6T3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RPAP3Q9H6T3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.63■■■□□ 2.49
RPAP3Q9H6T3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RPAP3Q9H6T3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RPAP3Q9H6T3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
RPAP3Q9H6T3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RPAP3Q9H6T3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L13-201ENST00000554103 1267 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L15-201ENST00000611059 1267 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L23-201ENST00000615195 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L24-201ENST00000617576 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L22-201ENST00000618238 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L20-201ENST00000619712 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L21-201ENST00000622058 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L10-201ENST00000622460 1267 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 DUX4L25-201ENST00000624915 1269 ntBASIC30.59■■■□□ 2.49
RPAP3Q9H6T3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RPAP3Q9H6T3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RPAP3Q9H6T3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RPAP3Q9H6T3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP3Q9H6T3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP3Q9H6T3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.56■■■□□ 2.48
RPAP3Q9H6T3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.56■■■□□ 2.48
RPAP3Q9H6T3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.55■■■□□ 2.48
RPAP3Q9H6T3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.54■■■□□ 2.48
RPAP3Q9H6T3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.54■■■□□ 2.48
RPAP3Q9H6T3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RPAP3Q9H6T3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RPAP3Q9H6T3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.51■■■□□ 2.47
RPAP3Q9H6T3 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.51■■■□□ 2.47
RPAP3Q9H6T3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.5■■■□□ 2.47
RPAP3Q9H6T3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RPAP3Q9H6T3 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.49■■■□□ 2.47
RPAP3Q9H6T3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
RPAP3Q9H6T3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
RPAP3Q9H6T3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
RPAP3Q9H6T3 AC010864.1-201ENST00000609407 1511 ntBASIC30.48■■■□□ 2.47
RPAP3Q9H6T3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
RPAP3Q9H6T3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
RPAP3Q9H6T3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RPAP3Q9H6T3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
RPAP3Q9H6T3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.47■■■□□ 2.47
RPAP3Q9H6T3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RPAP3Q9H6T3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RPAP3Q9H6T3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
RPAP3Q9H6T3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.45■■■□□ 2.46
RPAP3Q9H6T3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RPAP3Q9H6T3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RPAP3Q9H6T3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RPAP3Q9H6T3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.43■■■□□ 2.46
RPAP3Q9H6T3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RPAP3Q9H6T3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.42■■■□□ 2.46
RPAP3Q9H6T3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RPAP3Q9H6T3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RPAP3Q9H6T3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RPAP3Q9H6T3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RPAP3Q9H6T3 LINC00273-201ENST00000539813 1452 ntBASIC30.39■■■□□ 2.46
RPAP3Q9H6T3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.39■■■□□ 2.46
RPAP3Q9H6T3 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.39■■■□□ 2.46
RPAP3Q9H6T3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RPAP3Q9H6T3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RPAP3Q9H6T3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms