Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CDCP1Q9H5V8 ZNRF2P2-203ENST00000454624 420 ntBASIC24.47■■□□□ 1.51
CDCP1Q9H5V8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDCP1Q9H5V8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDCP1Q9H5V8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.46■■□□□ 1.51
CDCP1Q9H5V8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.46■■□□□ 1.51
CDCP1Q9H5V8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDCP1Q9H5V8 AC021231.2-201ENST00000594613 730 ntBASIC24.45■■□□□ 1.5
CDCP1Q9H5V8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDCP1Q9H5V8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.44■■□□□ 1.5
CDCP1Q9H5V8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDCP1Q9H5V8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CDCP1Q9H5V8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.43■■□□□ 1.5
CDCP1Q9H5V8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDCP1Q9H5V8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDCP1Q9H5V8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CDCP1Q9H5V8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDCP1Q9H5V8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDCP1Q9H5V8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.42■■□□□ 1.5
CDCP1Q9H5V8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDCP1Q9H5V8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDCP1Q9H5V8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDCP1Q9H5V8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CDCP1Q9H5V8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDCP1Q9H5V8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDCP1Q9H5V8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.37■■□□□ 1.49
CDCP1Q9H5V8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CDCP1Q9H5V8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDCP1Q9H5V8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CDCP1Q9H5V8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.36■■□□□ 1.49
CDCP1Q9H5V8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDCP1Q9H5V8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDCP1Q9H5V8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.36■■□□□ 1.49
CDCP1Q9H5V8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDCP1Q9H5V8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.35■■□□□ 1.49
CDCP1Q9H5V8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCP1Q9H5V8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDCP1Q9H5V8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCP1Q9H5V8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCP1Q9H5V8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCP1Q9H5V8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCP1Q9H5V8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCP1Q9H5V8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CDCP1Q9H5V8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDCP1Q9H5V8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.3■■□□□ 1.48
CDCP1Q9H5V8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDCP1Q9H5V8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDCP1Q9H5V8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CDCP1Q9H5V8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.29■■□□□ 1.48
CDCP1Q9H5V8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDCP1Q9H5V8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
CDCP1Q9H5V8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCP1Q9H5V8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.28■■□□□ 1.48
CDCP1Q9H5V8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCP1Q9H5V8 AC010864.1-201ENST00000609407 1511 ntBASIC24.28■■□□□ 1.48
CDCP1Q9H5V8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDCP1Q9H5V8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDCP1Q9H5V8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDCP1Q9H5V8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCP1Q9H5V8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CDCP1Q9H5V8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.23■■□□□ 1.47
CDCP1Q9H5V8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.23■■□□□ 1.47
CDCP1Q9H5V8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCP1Q9H5V8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCP1Q9H5V8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDCP1Q9H5V8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CDCP1Q9H5V8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CDCP1Q9H5V8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCP1Q9H5V8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.21■■□□□ 1.47
CDCP1Q9H5V8 HLA-V-202ENST00000446817 847 ntBASIC24.2■■□□□ 1.46
CDCP1Q9H5V8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDCP1Q9H5V8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDCP1Q9H5V8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDCP1Q9H5V8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.19■■□□□ 1.46
CDCP1Q9H5V8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
CDCP1Q9H5V8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDCP1Q9H5V8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.18■■□□□ 1.46
CDCP1Q9H5V8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.18■■□□□ 1.46
CDCP1Q9H5V8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDCP1Q9H5V8 AL135925.1-201ENST00000605920 1701 ntBASIC24.17■■□□□ 1.46
CDCP1Q9H5V8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDCP1Q9H5V8 LINC01971-201ENST00000617888 1048 ntBASIC24.16■■□□□ 1.46
CDCP1Q9H5V8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.14■■□□□ 1.45
CDCP1Q9H5V8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.14■■□□□ 1.45
CDCP1Q9H5V8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CDCP1Q9H5V8 DUX4L11-201ENST00000611504 1267 ntBASIC24.13■■□□□ 1.45
CDCP1Q9H5V8 DUX4L12-201ENST00000614593 1267 ntBASIC24.13■■□□□ 1.45
CDCP1Q9H5V8 DUX4L14-201ENST00000621227 1267 ntBASIC24.13■■□□□ 1.45
CDCP1Q9H5V8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.12■■□□□ 1.45
CDCP1Q9H5V8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDCP1Q9H5V8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.1■■□□□ 1.45
CDCP1Q9H5V8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDCP1Q9H5V8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDCP1Q9H5V8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDCP1Q9H5V8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms