Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KCNF1Q9H3M0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KCNF1Q9H3M0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KCNF1Q9H3M0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
KCNF1Q9H3M0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
KCNF1Q9H3M0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.94■■■□□ 2.22
KCNF1Q9H3M0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
KCNF1Q9H3M0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
KCNF1Q9H3M0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNF1Q9H3M0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.93■■■□□ 2.22
KCNF1Q9H3M0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
KCNF1Q9H3M0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
KCNF1Q9H3M0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNF1Q9H3M0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
KCNF1Q9H3M0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.92■■■□□ 2.22
KCNF1Q9H3M0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
KCNF1Q9H3M0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.91■■■□□ 2.22
KCNF1Q9H3M0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
KCNF1Q9H3M0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
KCNF1Q9H3M0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KCNF1Q9H3M0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNF1Q9H3M0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNF1Q9H3M0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNF1Q9H3M0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
KCNF1Q9H3M0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
KCNF1Q9H3M0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
KCNF1Q9H3M0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
KCNF1Q9H3M0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
KCNF1Q9H3M0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
KCNF1Q9H3M0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
KCNF1Q9H3M0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
KCNF1Q9H3M0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
KCNF1Q9H3M0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.82■■■□□ 2.2
KCNF1Q9H3M0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
KCNF1Q9H3M0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KCNF1Q9H3M0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
KCNF1Q9H3M0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KCNF1Q9H3M0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
KCNF1Q9H3M0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KCNF1Q9H3M0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KCNF1Q9H3M0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.77■■■□□ 2.2
KCNF1Q9H3M0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KCNF1Q9H3M0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.76■■■□□ 2.19
KCNF1Q9H3M0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
KCNF1Q9H3M0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
KCNF1Q9H3M0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
KCNF1Q9H3M0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.74■■■□□ 2.19
KCNF1Q9H3M0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNF1Q9H3M0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNF1Q9H3M0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KCNF1Q9H3M0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.73■■■□□ 2.19
KCNF1Q9H3M0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KCNF1Q9H3M0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.71■■■□□ 2.19
KCNF1Q9H3M0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
KCNF1Q9H3M0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KCNF1Q9H3M0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.71■■■□□ 2.19
KCNF1Q9H3M0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
KCNF1Q9H3M0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
KCNF1Q9H3M0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
KCNF1Q9H3M0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.69■■■□□ 2.18
KCNF1Q9H3M0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
KCNF1Q9H3M0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KCNF1Q9H3M0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.66■■■□□ 2.18
KCNF1Q9H3M0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
KCNF1Q9H3M0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
KCNF1Q9H3M0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
KCNF1Q9H3M0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
KCNF1Q9H3M0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.63■■■□□ 2.17
KCNF1Q9H3M0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
KCNF1Q9H3M0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.62■■■□□ 2.17
KCNF1Q9H3M0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.61■■■□□ 2.17
KCNF1Q9H3M0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
KCNF1Q9H3M0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
KCNF1Q9H3M0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.6■■■□□ 2.17
KCNF1Q9H3M0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
KCNF1Q9H3M0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.59■■■□□ 2.17
KCNF1Q9H3M0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
KCNF1Q9H3M0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
KCNF1Q9H3M0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
KCNF1Q9H3M0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
KCNF1Q9H3M0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
KCNF1Q9H3M0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
KCNF1Q9H3M0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.57■■■□□ 2.16
KCNF1Q9H3M0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
KCNF1Q9H3M0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.57■■■□□ 2.16
KCNF1Q9H3M0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
KCNF1Q9H3M0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.55■■■□□ 2.16
KCNF1Q9H3M0 BX255925.1-201ENST00000566954 1854 ntBASIC28.55■■■□□ 2.16
KCNF1Q9H3M0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.55■■■□□ 2.16
KCNF1Q9H3M0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.54■■■□□ 2.16
KCNF1Q9H3M0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
KCNF1Q9H3M0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
KCNF1Q9H3M0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
KCNF1Q9H3M0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.53■■■□□ 2.16
KCNF1Q9H3M0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms