Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CYSTM1Q9H1C7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.8■□□□□ 0.12
CYSTM1Q9H1C7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CYSTM1Q9H1C7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CYSTM1Q9H1C7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC15.79■□□□□ 0.12
CYSTM1Q9H1C7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYSTM1Q9H1C7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC15.78■□□□□ 0.12
CYSTM1Q9H1C7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYSTM1Q9H1C7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYSTM1Q9H1C7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CYSTM1Q9H1C7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CYSTM1Q9H1C7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CYSTM1Q9H1C7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 AC133561.1-201ENST00000568600 2415 ntBASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CYSTM1Q9H1C7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 CLDN5-201ENST00000403084 2357 ntBASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC15.75■□□□□ 0.11
CYSTM1Q9H1C7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.74■□□□□ 0.11
CYSTM1Q9H1C7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC15.74■□□□□ 0.11
CYSTM1Q9H1C7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYSTM1Q9H1C7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYSTM1Q9H1C7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYSTM1Q9H1C7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.73■□□□□ 0.11
CYSTM1Q9H1C7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYSTM1Q9H1C7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
CYSTM1Q9H1C7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYSTM1Q9H1C7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.71■□□□□ 0.11
CYSTM1Q9H1C7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CYSTM1Q9H1C7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CYSTM1Q9H1C7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CYSTM1Q9H1C7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CYSTM1Q9H1C7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CYSTM1Q9H1C7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CYSTM1Q9H1C7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CYSTM1Q9H1C7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYSTM1Q9H1C7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CYSTM1Q9H1C7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYSTM1Q9H1C7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYSTM1Q9H1C7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYSTM1Q9H1C7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYSTM1Q9H1C7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYSTM1Q9H1C7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CYSTM1Q9H1C7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CYSTM1Q9H1C7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC15.65■□□□□ 0.1
CYSTM1Q9H1C7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CYSTM1Q9H1C7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.65■□□□□ 0.1
CYSTM1Q9H1C7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CYSTM1Q9H1C7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CYSTM1Q9H1C7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.64■□□□□ 0.09
CYSTM1Q9H1C7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC15.64■□□□□ 0.09
CYSTM1Q9H1C7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CYSTM1Q9H1C7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CYSTM1Q9H1C7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CYSTM1Q9H1C7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CYSTM1Q9H1C7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CYSTM1Q9H1C7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.6■□□□□ 0.09
CYSTM1Q9H1C7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CYSTM1Q9H1C7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.6■□□□□ 0.09
CYSTM1Q9H1C7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CYSTM1Q9H1C7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CYSTM1Q9H1C7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CYSTM1Q9H1C7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.58■□□□□ 0.08
CYSTM1Q9H1C7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms