Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdhd3Q9CYW4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdhd3Q9CYW4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdhd3Q9CYW4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hdhd3Q9CYW4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hdhd3Q9CYW4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdhd3Q9CYW4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Hdhd3Q9CYW4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdhd3Q9CYW4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdhd3Q9CYW4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdhd3Q9CYW4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdhd3Q9CYW4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdhd3Q9CYW4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdhd3Q9CYW4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hdhd3Q9CYW4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.59■□□□□ 0.73
Hdhd3Q9CYW4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hdhd3Q9CYW4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdhd3Q9CYW4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdhd3Q9CYW4 Peli2-204ENSMUST00000226513 1320 ntBASIC19.57■□□□□ 0.72
Hdhd3Q9CYW4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Hdhd3Q9CYW4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Hdhd3Q9CYW4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Hdhd3Q9CYW4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdhd3Q9CYW4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdhd3Q9CYW4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.51■□□□□ 0.71
Hdhd3Q9CYW4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hdhd3Q9CYW4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdhd3Q9CYW4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.5■□□□□ 0.71
Hdhd3Q9CYW4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hdhd3Q9CYW4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdhd3Q9CYW4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdhd3Q9CYW4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hdhd3Q9CYW4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hdhd3Q9CYW4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdhd3Q9CYW4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hdhd3Q9CYW4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdhd3Q9CYW4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Hdhd3Q9CYW4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdhd3Q9CYW4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdhd3Q9CYW4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdhd3Q9CYW4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdhd3Q9CYW4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hdhd3Q9CYW4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdhd3Q9CYW4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdhd3Q9CYW4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdhd3Q9CYW4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdhd3Q9CYW4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdhd3Q9CYW4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdhd3Q9CYW4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdhd3Q9CYW4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdhd3Q9CYW4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdhd3Q9CYW4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdhd3Q9CYW4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hdhd3Q9CYW4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdhd3Q9CYW4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdhd3Q9CYW4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdhd3Q9CYW4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdhd3Q9CYW4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdhd3Q9CYW4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.36■□□□□ 0.69
Hdhd3Q9CYW4 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.35■□□□□ 0.69
Hdhd3Q9CYW4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hdhd3Q9CYW4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdhd3Q9CYW4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdhd3Q9CYW4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdhd3Q9CYW4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdhd3Q9CYW4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdhd3Q9CYW4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdhd3Q9CYW4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdhd3Q9CYW4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdhd3Q9CYW4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Hdhd3Q9CYW4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdhd3Q9CYW4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdhd3Q9CYW4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdhd3Q9CYW4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hdhd3Q9CYW4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdhd3Q9CYW4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdhd3Q9CYW4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdhd3Q9CYW4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hdhd3Q9CYW4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms