Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.92■□□□□ 0.46
Mrpl35Q9CQL6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl35Q9CQL6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl35Q9CQL6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl35Q9CQL6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mrpl35Q9CQL6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mrpl35Q9CQL6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl35Q9CQL6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl35Q9CQL6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl35Q9CQL6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.88■□□□□ 0.45
Mrpl35Q9CQL6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.87■□□□□ 0.45
Mrpl35Q9CQL6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl35Q9CQL6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.86■□□□□ 0.45
Mrpl35Q9CQL6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.86■□□□□ 0.45
Mrpl35Q9CQL6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mrpl35Q9CQL6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Mrpl35Q9CQL6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl35Q9CQL6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl35Q9CQL6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl35Q9CQL6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.83■□□□□ 0.45
Mrpl35Q9CQL6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mrpl35Q9CQL6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mrpl35Q9CQL6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl35Q9CQL6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl35Q9CQL6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Mrpl35Q9CQL6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl35Q9CQL6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl35Q9CQL6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mrpl35Q9CQL6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mrpl35Q9CQL6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mrpl35Q9CQL6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mrpl35Q9CQL6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mrpl35Q9CQL6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mrpl35Q9CQL6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mrpl35Q9CQL6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mrpl35Q9CQL6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mrpl35Q9CQL6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Mrpl35Q9CQL6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.76■□□□□ 0.43
Mrpl35Q9CQL6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mrpl35Q9CQL6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mrpl35Q9CQL6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl35Q9CQL6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl35Q9CQL6 Amer2-203ENSMUST00000225247 2662 ntBASIC17.74■□□□□ 0.43
Mrpl35Q9CQL6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl35Q9CQL6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl35Q9CQL6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl35Q9CQL6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.72■□□□□ 0.43
Mrpl35Q9CQL6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl35Q9CQL6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl35Q9CQL6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl35Q9CQL6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.7■□□□□ 0.42
Mrpl35Q9CQL6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl35Q9CQL6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Mrpl35Q9CQL6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl35Q9CQL6 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.68■□□□□ 0.42
Mrpl35Q9CQL6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mrpl35Q9CQL6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl35Q9CQL6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl35Q9CQL6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl35Q9CQL6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl35Q9CQL6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl35Q9CQL6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Mrpl35Q9CQL6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mrpl35Q9CQL6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl35Q9CQL6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms