Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF407Q9C0G0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF407Q9C0G0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF407Q9C0G0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.84■■□□□ 1.41
ZNF407Q9C0G0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.84■■□□□ 1.41
ZNF407Q9C0G0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
ZNF407Q9C0G0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF407Q9C0G0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF407Q9C0G0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF407Q9C0G0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF407Q9C0G0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ZNF407Q9C0G0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF407Q9C0G0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF407Q9C0G0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF407Q9C0G0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF407Q9C0G0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 MIR3648-2-201ENST00000581792 180 ntBASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 MIR3648-1-201ENST00000615959 180 ntBASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF407Q9C0G0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.78■■□□□ 1.4
ZNF407Q9C0G0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF407Q9C0G0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF407Q9C0G0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF407Q9C0G0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF407Q9C0G0 CR559946.2-201ENST00000623684 991 ntBASIC23.76■■□□□ 1.39
ZNF407Q9C0G0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.75■■□□□ 1.39
ZNF407Q9C0G0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.75■■□□□ 1.39
ZNF407Q9C0G0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.74■■□□□ 1.39
ZNF407Q9C0G0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
ZNF407Q9C0G0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
ZNF407Q9C0G0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF407Q9C0G0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 MIR4449-201ENST00000578365 66 ntBASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 AC016575.1-201ENST00000607026 382 ntBASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF407Q9C0G0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 LINC01971-201ENST00000617888 1048 ntBASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
ZNF407Q9C0G0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZNF407Q9C0G0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF407Q9C0G0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF407Q9C0G0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
ZNF407Q9C0G0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF407Q9C0G0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.69■■□□□ 1.38
ZNF407Q9C0G0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.69■■□□□ 1.38
ZNF407Q9C0G0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.68■■□□□ 1.38
ZNF407Q9C0G0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
ZNF407Q9C0G0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF407Q9C0G0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF407Q9C0G0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 DUX4L11-201ENST00000611504 1267 ntBASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 DUX4L12-201ENST00000614593 1267 ntBASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 DUX4L14-201ENST00000621227 1267 ntBASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 AC010864.1-201ENST00000609407 1511 ntBASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF407Q9C0G0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF407Q9C0G0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF407Q9C0G0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.64■■□□□ 1.37
ZNF407Q9C0G0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZNF407Q9C0G0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZNF407Q9C0G0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
ZNF407Q9C0G0 MIR639-201ENST00000384974 98 ntBASIC23.62■■□□□ 1.37
ZNF407Q9C0G0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZNF407Q9C0G0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
ZNF407Q9C0G0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZNF407Q9C0G0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZNF407Q9C0G0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
ZNF407Q9C0G0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L13-201ENST00000554103 1267 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L15-201ENST00000611059 1267 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L23-201ENST00000615195 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L24-201ENST00000617576 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L22-201ENST00000618238 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L20-201ENST00000619712 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L21-201ENST00000622058 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L10-201ENST00000622460 1267 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 DUX4L25-201ENST00000624915 1269 ntBASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZNF407Q9C0G0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.59■■□□□ 1.37
ZNF407Q9C0G0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.58■■□□□ 1.37
ZNF407Q9C0G0 LINC00273-201ENST00000539813 1452 ntBASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms