Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DUX4L22-201ENST00000618238 1269 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L20-201ENST00000619712 1269 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L21-201ENST00000622058 1269 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L10-201ENST00000622460 1267 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L25-201ENST00000624915 1269 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RTFDC1Q9BY42 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.67■■■□□ 2.82
RTFDC1Q9BY42 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RTFDC1Q9BY42 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
RTFDC1Q9BY42 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.66■■■□□ 2.82
RTFDC1Q9BY42 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTFDC1Q9BY42 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RTFDC1Q9BY42 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
RTFDC1Q9BY42 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.62■■■□□ 2.81
RTFDC1Q9BY42 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RTFDC1Q9BY42 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.61■■■□□ 2.81
RTFDC1Q9BY42 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RTFDC1Q9BY42 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
RTFDC1Q9BY42 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
RTFDC1Q9BY42 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.6■■■□□ 2.81
RTFDC1Q9BY42 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.6■■■□□ 2.81
RTFDC1Q9BY42 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
RTFDC1Q9BY42 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RTFDC1Q9BY42 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RTFDC1Q9BY42 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.58■■■□□ 2.81
RTFDC1Q9BY42 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.57■■■□□ 2.8
RTFDC1Q9BY42 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.57■■■□□ 2.8
RTFDC1Q9BY42 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.56■■■□□ 2.8
RTFDC1Q9BY42 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.56■■■□□ 2.8
RTFDC1Q9BY42 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.56■■■□□ 2.8
RTFDC1Q9BY42 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RTFDC1Q9BY42 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RTFDC1Q9BY42 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RTFDC1Q9BY42 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RTFDC1Q9BY42 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RTFDC1Q9BY42 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.51■■■□□ 2.79
RTFDC1Q9BY42 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
RTFDC1Q9BY42 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.49■■■□□ 2.79
RTFDC1Q9BY42 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.49■■■□□ 2.79
RTFDC1Q9BY42 AC120057.4-201ENST00000624722 1615 ntBASIC32.48■■■□□ 2.79
RTFDC1Q9BY42 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
RTFDC1Q9BY42 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
RTFDC1Q9BY42 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.48■■■□□ 2.79
RTFDC1Q9BY42 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RTFDC1Q9BY42 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
RTFDC1Q9BY42 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.46■■■□□ 2.79
RTFDC1Q9BY42 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RTFDC1Q9BY42 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
RTFDC1Q9BY42 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
RTFDC1Q9BY42 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.45■■■□□ 2.79
RTFDC1Q9BY42 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
RTFDC1Q9BY42 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
RTFDC1Q9BY42 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
RTFDC1Q9BY42 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RTFDC1Q9BY42 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RTFDC1Q9BY42 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.41■■■□□ 2.78
RTFDC1Q9BY42 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.41■■■□□ 2.78
RTFDC1Q9BY42 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.4■■■□□ 2.78
RTFDC1Q9BY42 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.39■■■□□ 2.78
RTFDC1Q9BY42 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
RTFDC1Q9BY42 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.38■■■□□ 2.77
RTFDC1Q9BY42 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
RTFDC1Q9BY42 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
RTFDC1Q9BY42 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.35■■■□□ 2.77
RTFDC1Q9BY42 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.34■■■□□ 2.77
RTFDC1Q9BY42 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RTFDC1Q9BY42 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RTFDC1Q9BY42 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.32■■■□□ 2.76
RTFDC1Q9BY42 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RTFDC1Q9BY42 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RTFDC1Q9BY42 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RTFDC1Q9BY42 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RTFDC1Q9BY42 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RTFDC1Q9BY42 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RTFDC1Q9BY42 RARRES2P2-201ENST00000394842 485 ntBASIC32.3■■■□□ 2.76
RTFDC1Q9BY42 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.29■■■□□ 2.76
RTFDC1Q9BY42 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.28■■■□□ 2.76
RTFDC1Q9BY42 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.28■■■□□ 2.76
RTFDC1Q9BY42 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
RTFDC1Q9BY42 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
RTFDC1Q9BY42 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.28■■■□□ 2.76
RTFDC1Q9BY42 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RTFDC1Q9BY42 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RTFDC1Q9BY42 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
RTFDC1Q9BY42 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RTFDC1Q9BY42 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.26■■■□□ 2.75
RTFDC1Q9BY42 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RTFDC1Q9BY42 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.25■■■□□ 2.75
RTFDC1Q9BY42 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RTFDC1Q9BY42 LINC00273-201ENST00000539813 1452 ntBASIC32.24■■■□□ 2.75
RTFDC1Q9BY42 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
RTFDC1Q9BY42 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms