Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDH15Q96QU1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L13-201ENST00000554103 1267 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L15-201ENST00000611059 1267 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L23-201ENST00000615195 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L24-201ENST00000617576 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L22-201ENST00000618238 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L20-201ENST00000619712 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L21-201ENST00000622058 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L10-201ENST00000622460 1267 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 DUX4L25-201ENST00000624915 1269 ntBASIC26.2■■□□□ 1.78
PCDH15Q96QU1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
PCDH15Q96QU1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDH15Q96QU1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDH15Q96QU1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDH15Q96QU1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH15Q96QU1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH15Q96QU1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
PCDH15Q96QU1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH15Q96QU1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDH15Q96QU1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDH15Q96QU1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDH15Q96QU1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDH15Q96QU1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDH15Q96QU1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDH15Q96QU1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH15Q96QU1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDH15Q96QU1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDH15Q96QU1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
PCDH15Q96QU1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH15Q96QU1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH15Q96QU1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDH15Q96QU1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDH15Q96QU1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDH15Q96QU1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH15Q96QU1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.08■■□□□ 1.77
PCDH15Q96QU1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH15Q96QU1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDH15Q96QU1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDH15Q96QU1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDH15Q96QU1 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDH15Q96QU1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDH15Q96QU1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH15Q96QU1 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDH15Q96QU1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH15Q96QU1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH15Q96QU1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
PCDH15Q96QU1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDH15Q96QU1 RARRES2P2-201ENST00000394842 485 ntBASIC26■■□□□ 1.75
PCDH15Q96QU1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26■■□□□ 1.75
PCDH15Q96QU1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDH15Q96QU1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDH15Q96QU1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDH15Q96QU1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
PCDH15Q96QU1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH15Q96QU1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDH15Q96QU1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH15Q96QU1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH15Q96QU1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDH15Q96QU1 ABHD17AP5-201ENST00000580133 923 ntBASIC25.96■■□□□ 1.75
PCDH15Q96QU1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PCDH15Q96QU1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH15Q96QU1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH15Q96QU1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDH15Q96QU1 AC120057.4-201ENST00000624722 1615 ntBASIC25.94■■□□□ 1.74
PCDH15Q96QU1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDH15Q96QU1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH15Q96QU1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDH15Q96QU1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDH15Q96QU1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PCDH15Q96QU1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH15Q96QU1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH15Q96QU1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.89■■□□□ 1.73
PCDH15Q96QU1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH15Q96QU1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH15Q96QU1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDH15Q96QU1 GPX1-201ENST00000419349 1106 ntBASIC25.88■■□□□ 1.73
PCDH15Q96QU1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
PCDH15Q96QU1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDH15Q96QU1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH15Q96QU1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH15Q96QU1 LINC00273-201ENST00000539813 1452 ntBASIC25.87■■□□□ 1.73
PCDH15Q96QU1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDH15Q96QU1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDH15Q96QU1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDH15Q96QU1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms