Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP1S3Q96PC3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP1S3Q96PC3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S3Q96PC3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S3Q96PC3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP1S3Q96PC3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S3Q96PC3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
AP1S3Q96PC3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S3Q96PC3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP1S3Q96PC3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S3Q96PC3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP1S3Q96PC3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S3Q96PC3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 AC006077.2-201ENST00000623591 457 ntBASIC19.6■□□□□ 0.73
AP1S3Q96PC3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.6■□□□□ 0.73
AP1S3Q96PC3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S3Q96PC3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S3Q96PC3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
AP1S3Q96PC3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S3Q96PC3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S3Q96PC3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S3Q96PC3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S3Q96PC3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S3Q96PC3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S3Q96PC3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.56■□□□□ 0.72
AP1S3Q96PC3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S3Q96PC3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S3Q96PC3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.55■□□□□ 0.72
AP1S3Q96PC3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S3Q96PC3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.55■□□□□ 0.72
AP1S3Q96PC3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
AP1S3Q96PC3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S3Q96PC3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S3Q96PC3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S3Q96PC3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.53■□□□□ 0.72
AP1S3Q96PC3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S3Q96PC3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S3Q96PC3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S3Q96PC3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
AP1S3Q96PC3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S3Q96PC3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S3Q96PC3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
AP1S3Q96PC3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S3Q96PC3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
AP1S3Q96PC3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S3Q96PC3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S3Q96PC3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
AP1S3Q96PC3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
AP1S3Q96PC3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
AP1S3Q96PC3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.47■□□□□ 0.71
AP1S3Q96PC3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S3Q96PC3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S3Q96PC3 ST7-AS1-201ENST00000456775 1889 ntBASIC19.47■□□□□ 0.71
AP1S3Q96PC3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S3Q96PC3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S3Q96PC3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S3Q96PC3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S3Q96PC3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
AP1S3Q96PC3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.45■□□□□ 0.7
AP1S3Q96PC3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S3Q96PC3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S3Q96PC3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S3Q96PC3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S3Q96PC3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S3Q96PC3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S3Q96PC3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
AP1S3Q96PC3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S3Q96PC3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.42■□□□□ 0.7
AP1S3Q96PC3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
AP1S3Q96PC3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S3Q96PC3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S3Q96PC3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S3Q96PC3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S3Q96PC3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S3Q96PC3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S3Q96PC3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S3Q96PC3 ZNRF2P1-201ENST00000441407 443 ntBASIC19.4■□□□□ 0.7
AP1S3Q96PC3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S3Q96PC3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S3Q96PC3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S3Q96PC3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S3Q96PC3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S3Q96PC3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
AP1S3Q96PC3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
AP1S3Q96PC3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S3Q96PC3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.38■□□□□ 0.69
AP1S3Q96PC3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms