Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NPIPB3Q92617 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NPIPB3Q92617 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB3Q92617 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB3Q92617 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPB3Q92617 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB3Q92617 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB3Q92617 AL139393.2-201ENST00000608721 2025 ntBASIC20.6■□□□□ 0.89
NPIPB3Q92617 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB3Q92617 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB3Q92617 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.59■□□□□ 0.89
NPIPB3Q92617 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
NPIPB3Q92617 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPIPB3Q92617 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPIPB3Q92617 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.57■□□□□ 0.88
NPIPB3Q92617 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NPIPB3Q92617 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPB3Q92617 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NPIPB3Q92617 AC142086.6-201ENST00000621154 1765 ntBASIC20.57■□□□□ 0.88
NPIPB3Q92617 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB3Q92617 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NPIPB3Q92617 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPB3Q92617 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPB3Q92617 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB3Q92617 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB3Q92617 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.54■□□□□ 0.88
NPIPB3Q92617 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.54■□□□□ 0.88
NPIPB3Q92617 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NPIPB3Q92617 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPB3Q92617 AC010864.1-201ENST00000609407 1511 ntBASIC20.53■□□□□ 0.88
NPIPB3Q92617 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPB3Q92617 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NPIPB3Q92617 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPB3Q92617 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPB3Q92617 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPB3Q92617 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPB3Q92617 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPB3Q92617 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.51■□□□□ 0.87
NPIPB3Q92617 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB3Q92617 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPB3Q92617 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB3Q92617 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB3Q92617 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB3Q92617 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB3Q92617 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB3Q92617 RARRES2P7-201ENST00000567349 469 ntBASIC20.49■□□□□ 0.87
NPIPB3Q92617 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.49■□□□□ 0.87
NPIPB3Q92617 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB3Q92617 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
NPIPB3Q92617 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB3Q92617 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB3Q92617 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.47■□□□□ 0.87
NPIPB3Q92617 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.46■□□□□ 0.87
NPIPB3Q92617 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB3Q92617 DRD5P2-201ENST00000421395 2012 ntBASIC20.45■□□□□ 0.86
NPIPB3Q92617 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.45■□□□□ 0.86
NPIPB3Q92617 SETD8P1-201ENST00000623146 1180 ntBASIC20.45■□□□□ 0.86
NPIPB3Q92617 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB3Q92617 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB3Q92617 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NPIPB3Q92617 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB3Q92617 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
NPIPB3Q92617 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB3Q92617 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB3Q92617 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB3Q92617 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.44■□□□□ 0.86
NPIPB3Q92617 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB3Q92617 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPIPB3Q92617 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB3Q92617 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB3Q92617 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB3Q92617 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NPIPB3Q92617 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB3Q92617 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.43■□□□□ 0.86
NPIPB3Q92617 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.43■□□□□ 0.86
NPIPB3Q92617 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB3Q92617 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.42■□□□□ 0.86
NPIPB3Q92617 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB3Q92617 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPB3Q92617 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB3Q92617 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
NPIPB3Q92617 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB3Q92617 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB3Q92617 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB3Q92617 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB3Q92617 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB3Q92617 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NPIPB3Q92617 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPB3Q92617 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB3Q92617 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB3Q92617 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB3Q92617 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB3Q92617 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.37■□□□□ 0.85
NPIPB3Q92617 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB3Q92617 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms