Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.23■□□□□ 0.99
Chmp1aQ921W0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp1aQ921W0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp1aQ921W0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp1aQ921W0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp1aQ921W0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chmp1aQ921W0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp1aQ921W0 Peli2-204ENSMUST00000226513 1320 ntBASIC21.21■□□□□ 0.99
Chmp1aQ921W0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp1aQ921W0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp1aQ921W0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp1aQ921W0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp1aQ921W0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp1aQ921W0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp1aQ921W0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp1aQ921W0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Chmp1aQ921W0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp1aQ921W0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp1aQ921W0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.16■□□□□ 0.98
Chmp1aQ921W0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.16■□□□□ 0.98
Chmp1aQ921W0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp1aQ921W0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chmp1aQ921W0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp1aQ921W0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp1aQ921W0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Chmp1aQ921W0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp1aQ921W0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chmp1aQ921W0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp1aQ921W0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp1aQ921W0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp1aQ921W0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Chmp1aQ921W0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp1aQ921W0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp1aQ921W0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.1■□□□□ 0.97
Chmp1aQ921W0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp1aQ921W0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Chmp1aQ921W0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp1aQ921W0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp1aQ921W0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp1aQ921W0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Chmp1aQ921W0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp1aQ921W0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp1aQ921W0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp1aQ921W0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp1aQ921W0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Chmp1aQ921W0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Chmp1aQ921W0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.06■□□□□ 0.96
Chmp1aQ921W0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp1aQ921W0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Chmp1aQ921W0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp1aQ921W0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1aQ921W0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1aQ921W0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp1aQ921W0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
Chmp1aQ921W0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp1aQ921W0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp1aQ921W0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp1aQ921W0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1aQ921W0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1aQ921W0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chmp1aQ921W0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp1aQ921W0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chmp1aQ921W0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1aQ921W0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1aQ921W0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp1aQ921W0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1aQ921W0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1aQ921W0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp1aQ921W0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp1aQ921W0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp1aQ921W0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp1aQ921W0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp1aQ921W0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp1aQ921W0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp1aQ921W0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.97■□□□□ 0.95
Chmp1aQ921W0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp1aQ921W0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chmp1aQ921W0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp1aQ921W0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Chmp1aQ921W0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1aQ921W0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1aQ921W0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1aQ921W0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1aQ921W0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1aQ921W0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1aQ921W0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1aQ921W0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp1aQ921W0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.92■□□□□ 0.94
Chmp1aQ921W0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Chmp1aQ921W0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp1aQ921W0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chmp1aQ921W0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp1aQ921W0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp1aQ921W0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.9■□□□□ 0.94
Chmp1aQ921W0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms