Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhb22Q91XZ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhb22Q91XZ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb22Q91XZ8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb22Q91XZ8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb22Q91XZ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb22Q91XZ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.78■■■□□ 2.2
Pcdhb22Q91XZ8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhb22Q91XZ8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhb22Q91XZ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.77■■■□□ 2.2
Pcdhb22Q91XZ8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Pcdhb22Q91XZ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.76■■■□□ 2.19
Pcdhb22Q91XZ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdhb22Q91XZ8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhb22Q91XZ8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb22Q91XZ8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.7■■■□□ 2.18
Pcdhb22Q91XZ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Pcdhb22Q91XZ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb22Q91XZ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb22Q91XZ8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb22Q91XZ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb22Q91XZ8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.68■■■□□ 2.18
Pcdhb22Q91XZ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb22Q91XZ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhb22Q91XZ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.67■■■□□ 2.18
Pcdhb22Q91XZ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhb22Q91XZ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.67■■■□□ 2.18
Pcdhb22Q91XZ8 Amer2-203ENSMUST00000225247 2662 ntBASIC28.66■■■□□ 2.18
Pcdhb22Q91XZ8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pcdhb22Q91XZ8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Pcdhb22Q91XZ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhb22Q91XZ8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhb22Q91XZ8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhb22Q91XZ8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhb22Q91XZ8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdhb22Q91XZ8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdhb22Q91XZ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdhb22Q91XZ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.6■■■□□ 2.17
Pcdhb22Q91XZ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb22Q91XZ8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhb22Q91XZ8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Pcdhb22Q91XZ8 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.57■■■□□ 2.16
Pcdhb22Q91XZ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdhb22Q91XZ8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdhb22Q91XZ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pcdhb22Q91XZ8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pcdhb22Q91XZ8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.54■■■□□ 2.16
Pcdhb22Q91XZ8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Pcdhb22Q91XZ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Pcdhb22Q91XZ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.52■■■□□ 2.16
Pcdhb22Q91XZ8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.52■■■□□ 2.16
Pcdhb22Q91XZ8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Pcdhb22Q91XZ8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhb22Q91XZ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdhb22Q91XZ8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.5■■■□□ 2.15
Pcdhb22Q91XZ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.5■■■□□ 2.15
Pcdhb22Q91XZ8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdhb22Q91XZ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pcdhb22Q91XZ8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pcdhb22Q91XZ8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb22Q91XZ8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Pcdhb22Q91XZ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb22Q91XZ8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb22Q91XZ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pcdhb22Q91XZ8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.44■■■□□ 2.14
Pcdhb22Q91XZ8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pcdhb22Q91XZ8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdhb22Q91XZ8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdhb22Q91XZ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pcdhb22Q91XZ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pcdhb22Q91XZ8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pcdhb22Q91XZ8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Pcdhb22Q91XZ8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Pcdhb22Q91XZ8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pcdhb22Q91XZ8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.34■■■□□ 2.13
Pcdhb22Q91XZ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.34■■■□□ 2.13
Pcdhb22Q91XZ8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pcdhb22Q91XZ8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pcdhb22Q91XZ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhb22Q91XZ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhb22Q91XZ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhb22Q91XZ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhb22Q91XZ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.31■■■□□ 2.12
Pcdhb22Q91XZ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhb22Q91XZ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhb22Q91XZ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdhb22Q91XZ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdhb22Q91XZ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdhb22Q91XZ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pcdhb22Q91XZ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.28■■■□□ 2.12
Pcdhb22Q91XZ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhb22Q91XZ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhb22Q91XZ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Pcdhb22Q91XZ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdhb22Q91XZ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms