Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb3Q91XZ7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb3Q91XZ7 Peli2-204ENSMUST00000226513 1320 ntBASIC23.98■■□□□ 1.43
Pcdhb3Q91XZ7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
Pcdhb3Q91XZ7 Gm16148-201ENSMUST00000119653 893 ntBASIC23.97■■□□□ 1.43
Pcdhb3Q91XZ7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Pcdhb3Q91XZ7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhb3Q91XZ7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pcdhb3Q91XZ7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb3Q91XZ7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb3Q91XZ7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb3Q91XZ7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb3Q91XZ7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb3Q91XZ7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhb3Q91XZ7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb3Q91XZ7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Pcdhb3Q91XZ7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb3Q91XZ7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb3Q91XZ7 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.93■■□□□ 1.42
Pcdhb3Q91XZ7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb3Q91XZ7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb3Q91XZ7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhb3Q91XZ7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhb3Q91XZ7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhb3Q91XZ7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb3Q91XZ7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb3Q91XZ7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb3Q91XZ7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb3Q91XZ7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Pcdhb3Q91XZ7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb3Q91XZ7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb3Q91XZ7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb3Q91XZ7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb3Q91XZ7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Pcdhb3Q91XZ7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb3Q91XZ7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdhb3Q91XZ7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb3Q91XZ7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb3Q91XZ7 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.83■■□□□ 1.41
Pcdhb3Q91XZ7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb3Q91XZ7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb3Q91XZ7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb3Q91XZ7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.81■■□□□ 1.4
Pcdhb3Q91XZ7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb3Q91XZ7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb3Q91XZ7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb3Q91XZ7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb3Q91XZ7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb3Q91XZ7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb3Q91XZ7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb3Q91XZ7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb3Q91XZ7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb3Q91XZ7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb3Q91XZ7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb3Q91XZ7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb3Q91XZ7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pcdhb3Q91XZ7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Pcdhb3Q91XZ7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb3Q91XZ7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb3Q91XZ7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb3Q91XZ7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb3Q91XZ7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb3Q91XZ7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb3Q91XZ7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb3Q91XZ7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb3Q91XZ7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb3Q91XZ7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb3Q91XZ7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Pcdhb3Q91XZ7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdhb3Q91XZ7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb3Q91XZ7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdhb3Q91XZ7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb3Q91XZ7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Pcdhb3Q91XZ7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb3Q91XZ7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Pcdhb3Q91XZ7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcdhb3Q91XZ7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb3Q91XZ7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb3Q91XZ7 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.67■■□□□ 1.38
Pcdhb3Q91XZ7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb3Q91XZ7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb3Q91XZ7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb3Q91XZ7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.65■■□□□ 1.38
Pcdhb3Q91XZ7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.65■■□□□ 1.38
Pcdhb3Q91XZ7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhb3Q91XZ7 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.64■■□□□ 1.38
Pcdhb3Q91XZ7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
Pcdhb3Q91XZ7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb3Q91XZ7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Pcdhb3Q91XZ7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms