Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb5Q91XX5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Pcdhgb5Q91XX5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb5Q91XX5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb5Q91XX5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Pcdhgb5Q91XX5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhgb5Q91XX5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhgb5Q91XX5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Gm11599-201ENSMUST00000118720 878 ntBASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
Pcdhgb5Q91XX5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhgb5Q91XX5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.34■■□□□ 1.49
Pcdhgb5Q91XX5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb5Q91XX5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhgb5Q91XX5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.32■■□□□ 1.48
Pcdhgb5Q91XX5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Pcdhgb5Q91XX5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.31■■□□□ 1.48
Pcdhgb5Q91XX5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhgb5Q91XX5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgb5Q91XX5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgb5Q91XX5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhgb5Q91XX5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgb5Q91XX5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgb5Q91XX5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgb5Q91XX5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhgb5Q91XX5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdhgb5Q91XX5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhgb5Q91XX5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb5Q91XX5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb5Q91XX5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb5Q91XX5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgb5Q91XX5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Pcdhgb5Q91XX5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.2■■□□□ 1.47
Pcdhgb5Q91XX5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.19■■□□□ 1.46
Pcdhgb5Q91XX5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgb5Q91XX5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgb5Q91XX5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgb5Q91XX5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgb5Q91XX5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdhgb5Q91XX5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhgb5Q91XX5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Pcdhgb5Q91XX5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhgb5Q91XX5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgb5Q91XX5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgb5Q91XX5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgb5Q91XX5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.15■■□□□ 1.46
Pcdhgb5Q91XX5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Pcdhgb5Q91XX5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Pcdhgb5Q91XX5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgb5Q91XX5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgb5Q91XX5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.13■■□□□ 1.45
Pcdhgb5Q91XX5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhgb5Q91XX5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.13■■□□□ 1.45
Pcdhgb5Q91XX5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Pcdhgb5Q91XX5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb5Q91XX5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb5Q91XX5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.1■■□□□ 1.45
Pcdhgb5Q91XX5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.1■■□□□ 1.45
Pcdhgb5Q91XX5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb5Q91XX5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgb5Q91XX5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.09■■□□□ 1.45
Pcdhgb5Q91XX5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.09■■□□□ 1.45
Pcdhgb5Q91XX5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhgb5Q91XX5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhgb5Q91XX5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhgb5Q91XX5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhgb5Q91XX5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Pcdhgb5Q91XX5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhgb5Q91XX5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhgb5Q91XX5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Pcdhgb5Q91XX5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhgb5Q91XX5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhgb5Q91XX5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb5Q91XX5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb5Q91XX5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb5Q91XX5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Pcdhgb5Q91XX5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb5Q91XX5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdhgb5Q91XX5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb5Q91XX5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb5Q91XX5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb5Q91XX5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24■■□□□ 1.43
Pcdhgb5Q91XX5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24■■□□□ 1.43
Pcdhgb5Q91XX5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb5Q91XX5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24■■□□□ 1.43
Pcdhgb5Q91XX5 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.98■■□□□ 1.43
Pcdhgb5Q91XX5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb5Q91XX5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Pcdhgb5Q91XX5 Particl-201ENSMUST00000205370 1560 ntBASIC23.96■■□□□ 1.43
Pcdhgb5Q91XX5 Gm30023-201ENSMUST00000197970 889 ntBASIC23.96■■□□□ 1.43
Pcdhgb5Q91XX5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms