Protein–RNA interactions for Protein: Q8VHS2

Crb1, Protein crumbs homolog 1, mousemouse

Predictions only

Length 1,405 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crb1Q8VHS2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Crb1Q8VHS2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Crb1Q8VHS2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Crb1Q8VHS2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Crb1Q8VHS2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Crb1Q8VHS2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.67■■■□□ 2.66
Crb1Q8VHS2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Crb1Q8VHS2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.66■■■□□ 2.66
Crb1Q8VHS2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.64■■■□□ 2.66
Crb1Q8VHS2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Crb1Q8VHS2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Crb1Q8VHS2 Gm11175-201ENSMUST00000116172 543 ntBASIC31.58■■■□□ 2.65
Crb1Q8VHS2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Crb1Q8VHS2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Crb1Q8VHS2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Crb1Q8VHS2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Crb1Q8VHS2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Crb1Q8VHS2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Crb1Q8VHS2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Crb1Q8VHS2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Crb1Q8VHS2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.54■■■□□ 2.64
Crb1Q8VHS2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Crb1Q8VHS2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Crb1Q8VHS2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Crb1Q8VHS2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Crb1Q8VHS2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Crb1Q8VHS2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.5■■■□□ 2.63
Crb1Q8VHS2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.5■■■□□ 2.63
Crb1Q8VHS2 Mir6538-201ENSMUST00000183713 110 ntBASIC31.49■■■□□ 2.63
Crb1Q8VHS2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Crb1Q8VHS2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Crb1Q8VHS2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.47■■■□□ 2.63
Crb1Q8VHS2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Crb1Q8VHS2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Crb1Q8VHS2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Crb1Q8VHS2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Crb1Q8VHS2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Crb1Q8VHS2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Crb1Q8VHS2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Crb1Q8VHS2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Crb1Q8VHS2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Crb1Q8VHS2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Crb1Q8VHS2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
Crb1Q8VHS2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.41■■■□□ 2.62
Crb1Q8VHS2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Crb1Q8VHS2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Crb1Q8VHS2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Crb1Q8VHS2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Crb1Q8VHS2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.37■■■□□ 2.61
Crb1Q8VHS2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Crb1Q8VHS2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Crb1Q8VHS2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Crb1Q8VHS2 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.36■■■□□ 2.61
Crb1Q8VHS2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Crb1Q8VHS2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Crb1Q8VHS2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Crb1Q8VHS2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Crb1Q8VHS2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Crb1Q8VHS2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.33■■■□□ 2.61
Crb1Q8VHS2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Crb1Q8VHS2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Crb1Q8VHS2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Crb1Q8VHS2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Crb1Q8VHS2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Crb1Q8VHS2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Crb1Q8VHS2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Crb1Q8VHS2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Crb1Q8VHS2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Crb1Q8VHS2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Crb1Q8VHS2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Crb1Q8VHS2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Crb1Q8VHS2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.24■■■□□ 2.59
Crb1Q8VHS2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Crb1Q8VHS2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.23■■■□□ 2.59
Crb1Q8VHS2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Crb1Q8VHS2 Gm30023-201ENSMUST00000197970 889 ntBASIC31.23■■■□□ 2.59
Crb1Q8VHS2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
Crb1Q8VHS2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Crb1Q8VHS2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Crb1Q8VHS2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.19■■■□□ 2.58
Crb1Q8VHS2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Crb1Q8VHS2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.16■■■□□ 2.58
Crb1Q8VHS2 Cap2-205ENSMUST00000225824 1634 ntBASIC31.16■■■□□ 2.58
Crb1Q8VHS2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Crb1Q8VHS2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Crb1Q8VHS2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.14■■■□□ 2.58
Crb1Q8VHS2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Crb1Q8VHS2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Crb1Q8VHS2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.12■■■□□ 2.57
Crb1Q8VHS2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Crb1Q8VHS2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Crb1Q8VHS2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Crb1Q8VHS2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.11■■■□□ 2.57
Crb1Q8VHS2 Gm6311-201ENSMUST00000073790 878 ntBASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms