Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
BCAS4Q8TDM0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BCAS4Q8TDM0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
BCAS4Q8TDM0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
BCAS4Q8TDM0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
BCAS4Q8TDM0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BCAS4Q8TDM0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BCAS4Q8TDM0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BCAS4Q8TDM0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BCAS4Q8TDM0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.56■■□□□ 1.84
BCAS4Q8TDM0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.55■■□□□ 1.84
BCAS4Q8TDM0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
BCAS4Q8TDM0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BCAS4Q8TDM0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BCAS4Q8TDM0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.52■■□□□ 1.84
BCAS4Q8TDM0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
BCAS4Q8TDM0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BCAS4Q8TDM0 AL135925.1-201ENST00000605920 1701 ntBASIC26.5■■□□□ 1.83
BCAS4Q8TDM0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
BCAS4Q8TDM0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BCAS4Q8TDM0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BCAS4Q8TDM0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
BCAS4Q8TDM0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
BCAS4Q8TDM0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BCAS4Q8TDM0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BCAS4Q8TDM0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
BCAS4Q8TDM0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BCAS4Q8TDM0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BCAS4Q8TDM0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
BCAS4Q8TDM0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 AL139393.2-201ENST00000608721 2025 ntBASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
BCAS4Q8TDM0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BCAS4Q8TDM0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BCAS4Q8TDM0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
BCAS4Q8TDM0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.42■■□□□ 1.82
BCAS4Q8TDM0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
BCAS4Q8TDM0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
BCAS4Q8TDM0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
BCAS4Q8TDM0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
BCAS4Q8TDM0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.41■■□□□ 1.82
BCAS4Q8TDM0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BCAS4Q8TDM0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
BCAS4Q8TDM0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
BCAS4Q8TDM0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
BCAS4Q8TDM0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
BCAS4Q8TDM0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BCAS4Q8TDM0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.37■■□□□ 1.81
BCAS4Q8TDM0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BCAS4Q8TDM0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BCAS4Q8TDM0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
BCAS4Q8TDM0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
BCAS4Q8TDM0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
BCAS4Q8TDM0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BCAS4Q8TDM0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.35■■□□□ 1.81
BCAS4Q8TDM0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BCAS4Q8TDM0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.34■■□□□ 1.81
BCAS4Q8TDM0 AL449106.1-201ENST00000608517 1980 ntBASIC26.33■■□□□ 1.81
BCAS4Q8TDM0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
BCAS4Q8TDM0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BCAS4Q8TDM0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
BCAS4Q8TDM0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
BCAS4Q8TDM0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
BCAS4Q8TDM0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
BCAS4Q8TDM0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BCAS4Q8TDM0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BCAS4Q8TDM0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BCAS4Q8TDM0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
BCAS4Q8TDM0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BCAS4Q8TDM0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BCAS4Q8TDM0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
BCAS4Q8TDM0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.29■■□□□ 1.8
BCAS4Q8TDM0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BCAS4Q8TDM0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BCAS4Q8TDM0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.27■■□□□ 1.8
BCAS4Q8TDM0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BCAS4Q8TDM0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BCAS4Q8TDM0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.26■■□□□ 1.79
BCAS4Q8TDM0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
BCAS4Q8TDM0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BCAS4Q8TDM0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BCAS4Q8TDM0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BCAS4Q8TDM0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.25■■□□□ 1.79
BCAS4Q8TDM0 AC015813.7-201ENST00000623294 581 ntBASIC26.24■■□□□ 1.79
BCAS4Q8TDM0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.24■■□□□ 1.79
BCAS4Q8TDM0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.23■■□□□ 1.79
BCAS4Q8TDM0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BCAS4Q8TDM0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BCAS4Q8TDM0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BCAS4Q8TDM0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.22■■□□□ 1.79
BCAS4Q8TDM0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
BCAS4Q8TDM0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BCAS4Q8TDM0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
BCAS4Q8TDM0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
BCAS4Q8TDM0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
BCAS4Q8TDM0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
BCAS4Q8TDM0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms