Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SMARCC2Q8TAQ2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SMARCC2Q8TAQ2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.9■■■□□ 2.54
SMARCC2Q8TAQ2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SMARCC2Q8TAQ2 AC139426.1-201ENST00000568218 2529 ntBASIC30.9■■■□□ 2.54
SMARCC2Q8TAQ2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SMARCC2Q8TAQ2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.54
SMARCC2Q8TAQ2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SMARCC2Q8TAQ2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SMARCC2Q8TAQ2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.88■■■□□ 2.53
SMARCC2Q8TAQ2 MIR3665-201ENST00000578708 105 ntBASIC30.88■■■□□ 2.53
SMARCC2Q8TAQ2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
SMARCC2Q8TAQ2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC2Q8TAQ2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC2Q8TAQ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC2Q8TAQ2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
SMARCC2Q8TAQ2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
SMARCC2Q8TAQ2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCC2Q8TAQ2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCC2Q8TAQ2 AC005559.1-201ENST00000589661 871 ntBASIC30.86■■■□□ 2.53
SMARCC2Q8TAQ2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
SMARCC2Q8TAQ2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCC2Q8TAQ2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.85■■■□□ 2.53
SMARCC2Q8TAQ2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCC2Q8TAQ2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCC2Q8TAQ2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCC2Q8TAQ2 DUX4L28-201ENST00000623687 678 ntBASIC30.83■■■□□ 2.53
SMARCC2Q8TAQ2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCC2Q8TAQ2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
SMARCC2Q8TAQ2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC2Q8TAQ2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
SMARCC2Q8TAQ2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCC2Q8TAQ2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCC2Q8TAQ2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCC2Q8TAQ2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
SMARCC2Q8TAQ2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCC2Q8TAQ2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCC2Q8TAQ2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCC2Q8TAQ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.77■■■□□ 2.52
SMARCC2Q8TAQ2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCC2Q8TAQ2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCC2Q8TAQ2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.77■■■□□ 2.52
SMARCC2Q8TAQ2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCC2Q8TAQ2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCC2Q8TAQ2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.75■■■□□ 2.51
SMARCC2Q8TAQ2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCC2Q8TAQ2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.73■■■□□ 2.51
SMARCC2Q8TAQ2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.73■■■□□ 2.51
SMARCC2Q8TAQ2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCC2Q8TAQ2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCC2Q8TAQ2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 AC010864.1-201ENST00000609407 1511 ntBASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 AC087741.3-201ENST00000624270 1347 ntBASIC30.71■■■□□ 2.51
SMARCC2Q8TAQ2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMARCC2Q8TAQ2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC2Q8TAQ2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.68■■■□□ 2.5
SMARCC2Q8TAQ2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.67■■■□□ 2.5
SMARCC2Q8TAQ2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCC2Q8TAQ2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCC2Q8TAQ2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCC2Q8TAQ2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCC2Q8TAQ2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.65■■■□□ 2.5
SMARCC2Q8TAQ2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.64■■■□□ 2.5
SMARCC2Q8TAQ2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC2Q8TAQ2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC2Q8TAQ2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
SMARCC2Q8TAQ2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.63■■■□□ 2.49
SMARCC2Q8TAQ2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SMARCC2Q8TAQ2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCC2Q8TAQ2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCC2Q8TAQ2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCC2Q8TAQ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCC2Q8TAQ2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCC2Q8TAQ2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.61■■■□□ 2.49
SMARCC2Q8TAQ2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCC2Q8TAQ2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.6■■■□□ 2.49
SMARCC2Q8TAQ2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCC2Q8TAQ2 AC044849.2-201ENST00000606596 710 ntBASIC30.59■■■□□ 2.49
SMARCC2Q8TAQ2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCC2Q8TAQ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCC2Q8TAQ2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCC2Q8TAQ2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCC2Q8TAQ2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SMARCC2Q8TAQ2 AL139393.2-201ENST00000608721 2025 ntBASIC30.57■■■□□ 2.49
SMARCC2Q8TAQ2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
SMARCC2Q8TAQ2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCC2Q8TAQ2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCC2Q8TAQ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SMARCC2Q8TAQ2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
SMARCC2Q8TAQ2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.55■■■□□ 2.48
SMARCC2Q8TAQ2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC2Q8TAQ2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
SMARCC2Q8TAQ2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC2Q8TAQ2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC2Q8TAQ2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCC2Q8TAQ2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms