Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIMC1Q8NDZ2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SIMC1Q8NDZ2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIMC1Q8NDZ2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SIMC1Q8NDZ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.65■■□□□ 1.54
SIMC1Q8NDZ2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SIMC1Q8NDZ2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SIMC1Q8NDZ2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SIMC1Q8NDZ2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 AC010864.1-201ENST00000609407 1511 ntBASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.63■■□□□ 1.53
SIMC1Q8NDZ2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SIMC1Q8NDZ2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.62■■□□□ 1.53
SIMC1Q8NDZ2 DUX4L28-201ENST00000623687 678 ntBASIC24.62■■□□□ 1.53
SIMC1Q8NDZ2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SIMC1Q8NDZ2 AC005559.1-201ENST00000589661 871 ntBASIC24.61■■□□□ 1.53
SIMC1Q8NDZ2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
SIMC1Q8NDZ2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SIMC1Q8NDZ2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SIMC1Q8NDZ2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SIMC1Q8NDZ2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.6■■□□□ 1.53
SIMC1Q8NDZ2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SIMC1Q8NDZ2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SIMC1Q8NDZ2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SIMC1Q8NDZ2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SIMC1Q8NDZ2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.59■■□□□ 1.53
SIMC1Q8NDZ2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SIMC1Q8NDZ2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SIMC1Q8NDZ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SIMC1Q8NDZ2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIMC1Q8NDZ2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 ABCB10P3-201ENST00000561950 2166 ntBASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SIMC1Q8NDZ2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.55■■□□□ 1.52
SIMC1Q8NDZ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SIMC1Q8NDZ2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SIMC1Q8NDZ2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SIMC1Q8NDZ2 AL162393.1-201ENST00000437852 946 ntBASIC24.54■■□□□ 1.52
SIMC1Q8NDZ2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SIMC1Q8NDZ2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SIMC1Q8NDZ2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SIMC1Q8NDZ2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SIMC1Q8NDZ2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SIMC1Q8NDZ2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.52■■□□□ 1.52
SIMC1Q8NDZ2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.51■■□□□ 1.51
SIMC1Q8NDZ2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SIMC1Q8NDZ2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
SIMC1Q8NDZ2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.5■■□□□ 1.51
SIMC1Q8NDZ2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SIMC1Q8NDZ2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.49■■□□□ 1.51
SIMC1Q8NDZ2 AP006261.1-201ENST00000584783 668 ntBASIC24.49■■□□□ 1.51
SIMC1Q8NDZ2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SIMC1Q8NDZ2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SIMC1Q8NDZ2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SIMC1Q8NDZ2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIMC1Q8NDZ2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SIMC1Q8NDZ2 MIR3665-201ENST00000578708 105 ntBASIC24.48■■□□□ 1.51
SIMC1Q8NDZ2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SIMC1Q8NDZ2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.46■■□□□ 1.51
SIMC1Q8NDZ2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SIMC1Q8NDZ2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
SIMC1Q8NDZ2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.45■■□□□ 1.5
SIMC1Q8NDZ2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.45■■□□□ 1.5
SIMC1Q8NDZ2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
SIMC1Q8NDZ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIMC1Q8NDZ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIMC1Q8NDZ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIMC1Q8NDZ2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SIMC1Q8NDZ2 AC087741.3-201ENST00000624270 1347 ntBASIC24.43■■□□□ 1.5
SIMC1Q8NDZ2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
SIMC1Q8NDZ2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SIMC1Q8NDZ2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIMC1Q8NDZ2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SIMC1Q8NDZ2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SIMC1Q8NDZ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIMC1Q8NDZ2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.4■■□□□ 1.5
SIMC1Q8NDZ2 RPS2P35-201ENST00000443417 897 ntBASIC24.4■■□□□ 1.5
SIMC1Q8NDZ2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIMC1Q8NDZ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIMC1Q8NDZ2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIMC1Q8NDZ2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms