Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.71■■□□□ 1.07
C11orf42Q8N5U0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.7■■□□□ 1.06
C11orf42Q8N5U0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.69■■□□□ 1.06
C11orf42Q8N5U0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
C11orf42Q8N5U0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf42Q8N5U0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf42Q8N5U0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf42Q8N5U0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf42Q8N5U0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.68■■□□□ 1.06
C11orf42Q8N5U0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf42Q8N5U0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf42Q8N5U0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.67■■□□□ 1.06
C11orf42Q8N5U0 AC010864.1-201ENST00000609407 1511 ntBASIC21.66■■□□□ 1.06
C11orf42Q8N5U0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf42Q8N5U0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf42Q8N5U0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf42Q8N5U0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.65■■□□□ 1.06
C11orf42Q8N5U0 ST7-AS1-201ENST00000456775 1889 ntBASIC21.65■■□□□ 1.06
C11orf42Q8N5U0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf42Q8N5U0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf42Q8N5U0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.65■■□□□ 1.06
C11orf42Q8N5U0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
C11orf42Q8N5U0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf42Q8N5U0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf42Q8N5U0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf42Q8N5U0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
C11orf42Q8N5U0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
C11orf42Q8N5U0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf42Q8N5U0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf42Q8N5U0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
C11orf42Q8N5U0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.61■■□□□ 1.05
C11orf42Q8N5U0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf42Q8N5U0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf42Q8N5U0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
C11orf42Q8N5U0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf42Q8N5U0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf42Q8N5U0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.59■■□□□ 1.05
C11orf42Q8N5U0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C11orf42Q8N5U0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C11orf42Q8N5U0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
C11orf42Q8N5U0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C11orf42Q8N5U0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.58■■□□□ 1.05
C11orf42Q8N5U0 AC044849.2-201ENST00000606596 710 ntBASIC21.58■■□□□ 1.05
C11orf42Q8N5U0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
C11orf42Q8N5U0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 ABCB10P1-201ENST00000614297 2181 ntBASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 MIR6090-201ENST00000622481 60 ntBASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.57■■□□□ 1.04
C11orf42Q8N5U0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C11orf42Q8N5U0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C11orf42Q8N5U0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
C11orf42Q8N5U0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
C11orf42Q8N5U0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf42Q8N5U0 AC108673.1-201ENST00000510422 1159 ntBASIC21.55■■□□□ 1.04
C11orf42Q8N5U0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.55■■□□□ 1.04
C11orf42Q8N5U0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C11orf42Q8N5U0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
C11orf42Q8N5U0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf42Q8N5U0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf42Q8N5U0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.52■■□□□ 1.04
C11orf42Q8N5U0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C11orf42Q8N5U0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
C11orf42Q8N5U0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
C11orf42Q8N5U0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
C11orf42Q8N5U0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.49■■□□□ 1.03
C11orf42Q8N5U0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
C11orf42Q8N5U0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C11orf42Q8N5U0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C11orf42Q8N5U0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
C11orf42Q8N5U0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
C11orf42Q8N5U0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C11orf42Q8N5U0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.47■■□□□ 1.03
C11orf42Q8N5U0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
C11orf42Q8N5U0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C11orf42Q8N5U0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C11orf42Q8N5U0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
C11orf42Q8N5U0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C11orf42Q8N5U0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C11orf42Q8N5U0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C11orf42Q8N5U0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.43■■□□□ 1.02
C11orf42Q8N5U0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
C11orf42Q8N5U0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
C11orf42Q8N5U0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C11orf42Q8N5U0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
C11orf42Q8N5U0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.41■■□□□ 1.02
C11orf42Q8N5U0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms