Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ATPAF2Q8N5M1 MIR3665-201ENST00000578708 105 ntBASIC26.95■■□□□ 1.9
ATPAF2Q8N5M1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ATPAF2Q8N5M1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ATPAF2Q8N5M1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
ATPAF2Q8N5M1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATPAF2Q8N5M1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.9■■□□□ 1.9
ATPAF2Q8N5M1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 AL162393.1-201ENST00000437852 946 ntBASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
ATPAF2Q8N5M1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ATPAF2Q8N5M1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ATPAF2Q8N5M1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATPAF2Q8N5M1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATPAF2Q8N5M1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATPAF2Q8N5M1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 AC087741.3-201ENST00000624270 1347 ntBASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATPAF2Q8N5M1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATPAF2Q8N5M1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 AC108673.1-201ENST00000510422 1159 ntBASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.72■■□□□ 1.87
ATPAF2Q8N5M1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
ATPAF2Q8N5M1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 AC044849.2-201ENST00000606596 710 ntBASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATPAF2Q8N5M1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 MIR6090-201ENST00000622481 60 ntBASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 AC127502.1-201ENST00000399971 1502 ntBASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 RPS2P35-201ENST00000443417 897 ntBASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATPAF2Q8N5M1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATPAF2Q8N5M1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 AC139426.1-201ENST00000568218 2529 ntBASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATPAF2Q8N5M1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
ATPAF2Q8N5M1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATPAF2Q8N5M1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms