Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cystm1Q8K353 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cystm1Q8K353 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cystm1Q8K353 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cystm1Q8K353 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cystm1Q8K353 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cystm1Q8K353 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cystm1Q8K353 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cystm1Q8K353 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cystm1Q8K353 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cystm1Q8K353 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cystm1Q8K353 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cystm1Q8K353 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cystm1Q8K353 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cystm1Q8K353 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Cystm1Q8K353 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cystm1Q8K353 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cystm1Q8K353 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cystm1Q8K353 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cystm1Q8K353 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cystm1Q8K353 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cystm1Q8K353 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cystm1Q8K353 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cystm1Q8K353 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.06■□□□□ 0
Cystm1Q8K353 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cystm1Q8K353 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cystm1Q8K353 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cystm1Q8K353 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cystm1Q8K353 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cystm1Q8K353 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cystm1Q8K353 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cystm1Q8K353 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cystm1Q8K353 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cystm1Q8K353 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cystm1Q8K353 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cystm1Q8K353 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cystm1Q8K353 Zfp131-207ENSMUST00000224946 1783 ntBASIC15.03■□□□□ -0
Cystm1Q8K353 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cystm1Q8K353 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cystm1Q8K353 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.02□□□□□ -0.01
Cystm1Q8K353 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cystm1Q8K353 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cystm1Q8K353 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.01□□□□□ -0.01
Cystm1Q8K353 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cystm1Q8K353 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cystm1Q8K353 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cystm1Q8K353 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cystm1Q8K353 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cystm1Q8K353 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cystm1Q8K353 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cystm1Q8K353 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cystm1Q8K353 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cystm1Q8K353 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cystm1Q8K353 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cystm1Q8K353 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cystm1Q8K353 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cystm1Q8K353 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cystm1Q8K353 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cystm1Q8K353 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cystm1Q8K353 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Cystm1Q8K353 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cystm1Q8K353 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cystm1Q8K353 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.94□□□□□ -0.02
Cystm1Q8K353 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cystm1Q8K353 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cystm1Q8K353 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cystm1Q8K353 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC14.93□□□□□ -0.02
Cystm1Q8K353 Zfp131-205ENSMUST00000223812 663 ntBASIC14.93□□□□□ -0.02
Cystm1Q8K353 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cystm1Q8K353 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cystm1Q8K353 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cystm1Q8K353 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cystm1Q8K353 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cystm1Q8K353 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.91□□□□□ -0.02
Cystm1Q8K353 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cystm1Q8K353 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms