Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nckap1lQ8K1X4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nckap1lQ8K1X4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Nckap1lQ8K1X4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Nckap1lQ8K1X4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.46■■□□□ 1.35
Nckap1lQ8K1X4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Nckap1lQ8K1X4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Nckap1lQ8K1X4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.45■■□□□ 1.34
Nckap1lQ8K1X4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nckap1lQ8K1X4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nckap1lQ8K1X4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
Nckap1lQ8K1X4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.43■■□□□ 1.34
Nckap1lQ8K1X4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.43■■□□□ 1.34
Nckap1lQ8K1X4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1lQ8K1X4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1lQ8K1X4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1lQ8K1X4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nckap1lQ8K1X4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nckap1lQ8K1X4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.4■■□□□ 1.34
Nckap1lQ8K1X4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nckap1lQ8K1X4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nckap1lQ8K1X4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Nckap1lQ8K1X4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nckap1lQ8K1X4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Nckap1lQ8K1X4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.39■■□□□ 1.33
Nckap1lQ8K1X4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nckap1lQ8K1X4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.38■■□□□ 1.33
Nckap1lQ8K1X4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.37■■□□□ 1.33
Nckap1lQ8K1X4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nckap1lQ8K1X4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.35■■□□□ 1.33
Nckap1lQ8K1X4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nckap1lQ8K1X4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.35■■□□□ 1.33
Nckap1lQ8K1X4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Nckap1lQ8K1X4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1lQ8K1X4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1lQ8K1X4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nckap1lQ8K1X4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nckap1lQ8K1X4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nckap1lQ8K1X4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nckap1lQ8K1X4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nckap1lQ8K1X4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nckap1lQ8K1X4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nckap1lQ8K1X4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.29■■□□□ 1.32
Nckap1lQ8K1X4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nckap1lQ8K1X4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nckap1lQ8K1X4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nckap1lQ8K1X4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Nckap1lQ8K1X4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nckap1lQ8K1X4 Gm9397-201ENSMUST00000200125 605 ntBASIC23.27■■□□□ 1.32
Nckap1lQ8K1X4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nckap1lQ8K1X4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nckap1lQ8K1X4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.24■■□□□ 1.31
Nckap1lQ8K1X4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.24■■□□□ 1.31
Nckap1lQ8K1X4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nckap1lQ8K1X4 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.23■■□□□ 1.31
Nckap1lQ8K1X4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nckap1lQ8K1X4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nckap1lQ8K1X4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nckap1lQ8K1X4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nckap1lQ8K1X4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nckap1lQ8K1X4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nckap1lQ8K1X4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Nckap1lQ8K1X4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.19■■□□□ 1.3
Nckap1lQ8K1X4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.19■■□□□ 1.3
Nckap1lQ8K1X4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nckap1lQ8K1X4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nckap1lQ8K1X4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Nckap1lQ8K1X4 Gm45855-201ENSMUST00000212546 880 ntBASIC23.17■■□□□ 1.3
Nckap1lQ8K1X4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nckap1lQ8K1X4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Nckap1lQ8K1X4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nckap1lQ8K1X4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nckap1lQ8K1X4 Gm24970-201ENSMUST00000175582 82 ntBASIC23.15■■□□□ 1.3
Nckap1lQ8K1X4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.15■■□□□ 1.3
Nckap1lQ8K1X4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Nckap1lQ8K1X4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nckap1lQ8K1X4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nckap1lQ8K1X4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nckap1lQ8K1X4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nckap1lQ8K1X4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Nckap1lQ8K1X4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nckap1lQ8K1X4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms