Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.89■■□□□ 1.89
CHPFQ8IZ52 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CHPFQ8IZ52 MIR639-201ENST00000384974 98 ntBASIC26.88■■□□□ 1.89
CHPFQ8IZ52 DUX4L11-201ENST00000611504 1267 ntBASIC26.88■■□□□ 1.89
CHPFQ8IZ52 DUX4L12-201ENST00000614593 1267 ntBASIC26.88■■□□□ 1.89
CHPFQ8IZ52 DUX4L14-201ENST00000621227 1267 ntBASIC26.88■■□□□ 1.89
CHPFQ8IZ52 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHPFQ8IZ52 MIR3648-2-201ENST00000581792 180 ntBASIC26.87■■□□□ 1.89
CHPFQ8IZ52 MIR3648-1-201ENST00000615959 180 ntBASIC26.87■■□□□ 1.89
CHPFQ8IZ52 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.87■■□□□ 1.89
CHPFQ8IZ52 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHPFQ8IZ52 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHPFQ8IZ52 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHPFQ8IZ52 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.86■■□□□ 1.89
CHPFQ8IZ52 AC016575.1-201ENST00000607026 382 ntBASIC26.86■■□□□ 1.89
CHPFQ8IZ52 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHPFQ8IZ52 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHPFQ8IZ52 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHPFQ8IZ52 AL161658.1-201ENST00000623641 1967 ntBASIC26.84■■□□□ 1.89
CHPFQ8IZ52 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHPFQ8IZ52 MIR4449-201ENST00000578365 66 ntBASIC26.84■■□□□ 1.89
CHPFQ8IZ52 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHPFQ8IZ52 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHPFQ8IZ52 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHPFQ8IZ52 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.83■■□□□ 1.89
CHPFQ8IZ52 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHPFQ8IZ52 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHPFQ8IZ52 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.82■■□□□ 1.88
CHPFQ8IZ52 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.82■■□□□ 1.88
CHPFQ8IZ52 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHPFQ8IZ52 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHPFQ8IZ52 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.81■■□□□ 1.88
CHPFQ8IZ52 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHPFQ8IZ52 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHPFQ8IZ52 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CHPFQ8IZ52 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.8■■□□□ 1.88
CHPFQ8IZ52 CR559946.2-201ENST00000623684 991 ntBASIC26.8■■□□□ 1.88
CHPFQ8IZ52 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHPFQ8IZ52 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHPFQ8IZ52 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.79■■□□□ 1.88
CHPFQ8IZ52 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
CHPFQ8IZ52 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHPFQ8IZ52 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHPFQ8IZ52 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHPFQ8IZ52 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.74■■□□□ 1.87
CHPFQ8IZ52 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHPFQ8IZ52 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHPFQ8IZ52 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHPFQ8IZ52 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.72■■□□□ 1.87
CHPFQ8IZ52 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHPFQ8IZ52 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHPFQ8IZ52 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.72■■□□□ 1.87
CHPFQ8IZ52 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.71■■□□□ 1.87
CHPFQ8IZ52 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHPFQ8IZ52 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHPFQ8IZ52 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHPFQ8IZ52 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHPFQ8IZ52 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHPFQ8IZ52 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.69■■□□□ 1.86
CHPFQ8IZ52 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CHPFQ8IZ52 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHPFQ8IZ52 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHPFQ8IZ52 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHPFQ8IZ52 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L13-201ENST00000554103 1267 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L15-201ENST00000611059 1267 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L23-201ENST00000615195 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L24-201ENST00000617576 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L22-201ENST00000618238 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L20-201ENST00000619712 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L21-201ENST00000622058 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L10-201ENST00000622460 1267 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 DUX4L25-201ENST00000624915 1269 ntBASIC26.66■■□□□ 1.86
CHPFQ8IZ52 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHPFQ8IZ52 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
CHPFQ8IZ52 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.64■■□□□ 1.86
CHPFQ8IZ52 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
CHPFQ8IZ52 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CHPFQ8IZ52 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CHPFQ8IZ52 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.63■■□□□ 1.85
CHPFQ8IZ52 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHPFQ8IZ52 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHPFQ8IZ52 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.62■■□□□ 1.85
CHPFQ8IZ52 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHPFQ8IZ52 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.61■■□□□ 1.85
CHPFQ8IZ52 AC010864.1-201ENST00000609407 1511 ntBASIC26.6■■□□□ 1.85
CHPFQ8IZ52 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHPFQ8IZ52 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.6■■□□□ 1.85
CHPFQ8IZ52 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
CHPFQ8IZ52 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.59■■□□□ 1.85
CHPFQ8IZ52 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.59■■□□□ 1.85
CHPFQ8IZ52 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms