Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SMC5Q8IY18 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
SMC5Q8IY18 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SMC5Q8IY18 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.77■■■□□ 2.84
SMC5Q8IY18 AC097358.2-201ENST00000607541 1159 ntBASIC32.77■■■□□ 2.84
SMC5Q8IY18 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SMC5Q8IY18 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.77■■■□□ 2.84
SMC5Q8IY18 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SMC5Q8IY18 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.76■■■□□ 2.83
SMC5Q8IY18 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
SMC5Q8IY18 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SMC5Q8IY18 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SMC5Q8IY18 AL139393.2-201ENST00000608721 2025 ntBASIC32.73■■■□□ 2.83
SMC5Q8IY18 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SMC5Q8IY18 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
SMC5Q8IY18 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SMC5Q8IY18 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
SMC5Q8IY18 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SMC5Q8IY18 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SMC5Q8IY18 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
SMC5Q8IY18 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SMC5Q8IY18 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.71■■■□□ 2.83
SMC5Q8IY18 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SMC5Q8IY18 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SMC5Q8IY18 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMC5Q8IY18 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMC5Q8IY18 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.69■■■□□ 2.82
SMC5Q8IY18 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
SMC5Q8IY18 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMC5Q8IY18 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMC5Q8IY18 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
SMC5Q8IY18 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMC5Q8IY18 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMC5Q8IY18 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.67■■■□□ 2.82
SMC5Q8IY18 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMC5Q8IY18 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMC5Q8IY18 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SMC5Q8IY18 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SMC5Q8IY18 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.62■■■□□ 2.81
SMC5Q8IY18 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
SMC5Q8IY18 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
SMC5Q8IY18 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
SMC5Q8IY18 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
SMC5Q8IY18 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
SMC5Q8IY18 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SMC5Q8IY18 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
SMC5Q8IY18 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.57■■■□□ 2.8
SMC5Q8IY18 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
SMC5Q8IY18 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SMC5Q8IY18 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMC5Q8IY18 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
SMC5Q8IY18 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMC5Q8IY18 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.54■■■□□ 2.8
SMC5Q8IY18 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMC5Q8IY18 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMC5Q8IY18 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMC5Q8IY18 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.8
SMC5Q8IY18 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SMC5Q8IY18 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SMC5Q8IY18 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SMC5Q8IY18 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SMC5Q8IY18 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SMC5Q8IY18 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.51■■■□□ 2.79
SMC5Q8IY18 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SMC5Q8IY18 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
SMC5Q8IY18 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.5■■■□□ 2.79
SMC5Q8IY18 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SMC5Q8IY18 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.49■■■□□ 2.79
SMC5Q8IY18 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SMC5Q8IY18 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SMC5Q8IY18 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.45■■■□□ 2.78
SMC5Q8IY18 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SMC5Q8IY18 SUZ12P1-203ENST00000578195 985 ntBASIC32.44■■■□□ 2.78
SMC5Q8IY18 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.44■■■□□ 2.78
SMC5Q8IY18 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SMC5Q8IY18 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SMC5Q8IY18 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.43■■■□□ 2.78
SMC5Q8IY18 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SMC5Q8IY18 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
SMC5Q8IY18 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.43■■■□□ 2.78
SMC5Q8IY18 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.43■■■□□ 2.78
SMC5Q8IY18 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
SMC5Q8IY18 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SMC5Q8IY18 DRD5P2-201ENST00000421395 2012 ntBASIC32.41■■■□□ 2.78
SMC5Q8IY18 AC142086.6-201ENST00000621154 1765 ntBASIC32.41■■■□□ 2.78
SMC5Q8IY18 MIR762-201ENST00000390236 83 ntBASIC32.41■■■□□ 2.78
SMC5Q8IY18 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.41■■■□□ 2.78
SMC5Q8IY18 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SMC5Q8IY18 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.4■■■□□ 2.78
SMC5Q8IY18 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.39■■■□□ 2.78
SMC5Q8IY18 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
SMC5Q8IY18 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMC5Q8IY18 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMC5Q8IY18 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.37■■■□□ 2.77
SMC5Q8IY18 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SMC5Q8IY18 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.37■■■□□ 2.77
SMC5Q8IY18 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMC5Q8IY18 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMC5Q8IY18 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.36■■■□□ 2.77
SMC5Q8IY18 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms