Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
Sox30Q8CGW4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sox30Q8CGW4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sox30Q8CGW4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sox30Q8CGW4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sox30Q8CGW4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sox30Q8CGW4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Sox30Q8CGW4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27■■□□□ 1.91
Sox30Q8CGW4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Sox30Q8CGW4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Sox30Q8CGW4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Sox30Q8CGW4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sox30Q8CGW4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sox30Q8CGW4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.96■■□□□ 1.91
Sox30Q8CGW4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Sox30Q8CGW4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sox30Q8CGW4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Sox30Q8CGW4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.95■■□□□ 1.9
Sox30Q8CGW4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.95■■□□□ 1.9
Sox30Q8CGW4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Sox30Q8CGW4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sox30Q8CGW4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Sox30Q8CGW4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Sox30Q8CGW4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Sox30Q8CGW4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
Sox30Q8CGW4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sox30Q8CGW4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sox30Q8CGW4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Sox30Q8CGW4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.86■■□□□ 1.89
Sox30Q8CGW4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Sox30Q8CGW4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Sox30Q8CGW4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Sox30Q8CGW4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Sox30Q8CGW4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Sox30Q8CGW4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Sox30Q8CGW4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Sox30Q8CGW4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
Sox30Q8CGW4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sox30Q8CGW4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sox30Q8CGW4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sox30Q8CGW4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Sox30Q8CGW4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Sox30Q8CGW4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Sox30Q8CGW4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sox30Q8CGW4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sox30Q8CGW4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Sox30Q8CGW4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sox30Q8CGW4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sox30Q8CGW4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sox30Q8CGW4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Sox30Q8CGW4 Gm24804-201ENSMUST00000174982 85 ntBASIC26.71■■□□□ 1.87
Sox30Q8CGW4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.71■■□□□ 1.87
Sox30Q8CGW4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Sox30Q8CGW4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.87
Sox30Q8CGW4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.69■■□□□ 1.86
Sox30Q8CGW4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sox30Q8CGW4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sox30Q8CGW4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Sox30Q8CGW4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sox30Q8CGW4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.64■■□□□ 1.86
Sox30Q8CGW4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Sox30Q8CGW4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sox30Q8CGW4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Sox30Q8CGW4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sox30Q8CGW4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sox30Q8CGW4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sox30Q8CGW4 Gm16148-201ENSMUST00000119653 893 ntBASIC26.62■■□□□ 1.85
Sox30Q8CGW4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sox30Q8CGW4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sox30Q8CGW4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sox30Q8CGW4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Sox30Q8CGW4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sox30Q8CGW4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Sox30Q8CGW4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sox30Q8CGW4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Sox30Q8CGW4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.57■■□□□ 1.84
Sox30Q8CGW4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Sox30Q8CGW4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sox30Q8CGW4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sox30Q8CGW4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
Sox30Q8CGW4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sox30Q8CGW4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sox30Q8CGW4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sox30Q8CGW4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sox30Q8CGW4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 145.9 ms