Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Rsph6aQ8CDR2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Rsph6aQ8CDR2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rsph6aQ8CDR2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rsph6aQ8CDR2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rsph6aQ8CDR2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Rsph6aQ8CDR2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Rsph6aQ8CDR2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
Rsph6aQ8CDR2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rsph6aQ8CDR2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Rsph6aQ8CDR2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Rsph6aQ8CDR2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rsph6aQ8CDR2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC32.41■■■□□ 2.78
Rsph6aQ8CDR2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.41■■■□□ 2.78
Rsph6aQ8CDR2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC32.4■■■□□ 2.78
Rsph6aQ8CDR2 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.39■■■□□ 2.78
Rsph6aQ8CDR2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Rsph6aQ8CDR2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
Rsph6aQ8CDR2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.36■■■□□ 2.77
Rsph6aQ8CDR2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rsph6aQ8CDR2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Rsph6aQ8CDR2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.35■■■□□ 2.77
Rsph6aQ8CDR2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Rsph6aQ8CDR2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC32.34■■■□□ 2.77
Rsph6aQ8CDR2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Rsph6aQ8CDR2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rsph6aQ8CDR2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Rsph6aQ8CDR2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.31■■■□□ 2.76
Rsph6aQ8CDR2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rsph6aQ8CDR2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rsph6aQ8CDR2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rsph6aQ8CDR2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Rsph6aQ8CDR2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rsph6aQ8CDR2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.28■■■□□ 2.76
Rsph6aQ8CDR2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Rsph6aQ8CDR2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rsph6aQ8CDR2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.25■■■□□ 2.75
Rsph6aQ8CDR2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rsph6aQ8CDR2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Rsph6aQ8CDR2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
Rsph6aQ8CDR2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Rsph6aQ8CDR2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.23■■■□□ 2.75
Rsph6aQ8CDR2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC32.22■■■□□ 2.75
Rsph6aQ8CDR2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Rsph6aQ8CDR2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.22■■■□□ 2.75
Rsph6aQ8CDR2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Rsph6aQ8CDR2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Rsph6aQ8CDR2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Rsph6aQ8CDR2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rsph6aQ8CDR2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rsph6aQ8CDR2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rsph6aQ8CDR2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Rsph6aQ8CDR2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
Rsph6aQ8CDR2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rsph6aQ8CDR2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Rsph6aQ8CDR2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Rsph6aQ8CDR2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.13■■■□□ 2.73
Rsph6aQ8CDR2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Rsph6aQ8CDR2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Rsph6aQ8CDR2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rsph6aQ8CDR2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Rsph6aQ8CDR2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.11■■■□□ 2.73
Rsph6aQ8CDR2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rsph6aQ8CDR2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.09■■■□□ 2.73
Rsph6aQ8CDR2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Rsph6aQ8CDR2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rsph6aQ8CDR2 Gm7432-201ENSMUST00000210343 879 ntBASIC32.08■■■□□ 2.73
Rsph6aQ8CDR2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rsph6aQ8CDR2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rsph6aQ8CDR2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rsph6aQ8CDR2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rsph6aQ8CDR2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.07■■■□□ 2.73
Rsph6aQ8CDR2 Zxda-201ENSMUST00000117281 2621 ntBASIC32.07■■■□□ 2.72
Rsph6aQ8CDR2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Rsph6aQ8CDR2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Rsph6aQ8CDR2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Rsph6aQ8CDR2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rsph6aQ8CDR2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.05■■■□□ 2.72
Rsph6aQ8CDR2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.04■■■□□ 2.72
Rsph6aQ8CDR2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Rsph6aQ8CDR2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rsph6aQ8CDR2 Gm30023-201ENSMUST00000197970 889 ntBASIC32.03■■■□□ 2.72
Rsph6aQ8CDR2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Rsph6aQ8CDR2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.02■■■□□ 2.72
Rsph6aQ8CDR2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rsph6aQ8CDR2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.02■■■□□ 2.72
Rsph6aQ8CDR2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Rsph6aQ8CDR2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Rsph6aQ8CDR2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Rsph6aQ8CDR2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Rsph6aQ8CDR2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Rsph6aQ8CDR2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.98■■■□□ 2.71
Rsph6aQ8CDR2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rsph6aQ8CDR2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.95■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms