Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp44Q8C2S0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Usp44Q8C2S0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.03■■■□□ 2.24
Usp44Q8C2S0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.02■■■□□ 2.24
Usp44Q8C2S0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Usp44Q8C2S0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.01■■■□□ 2.24
Usp44Q8C2S0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Usp44Q8C2S0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29■■■□□ 2.23
Usp44Q8C2S0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
Usp44Q8C2S0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Usp44Q8C2S0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp44Q8C2S0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp44Q8C2S0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.96■■■□□ 2.23
Usp44Q8C2S0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Usp44Q8C2S0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Usp44Q8C2S0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Usp44Q8C2S0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp44Q8C2S0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.91■■■□□ 2.22
Usp44Q8C2S0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.91■■■□□ 2.22
Usp44Q8C2S0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Usp44Q8C2S0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Usp44Q8C2S0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
Usp44Q8C2S0 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.89■■■□□ 2.21
Usp44Q8C2S0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Usp44Q8C2S0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Usp44Q8C2S0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Usp44Q8C2S0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Usp44Q8C2S0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.85■■■□□ 2.21
Usp44Q8C2S0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Usp44Q8C2S0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Usp44Q8C2S0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Usp44Q8C2S0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Usp44Q8C2S0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Usp44Q8C2S0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.83■■■□□ 2.21
Usp44Q8C2S0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Usp44Q8C2S0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Usp44Q8C2S0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.82■■■□□ 2.2
Usp44Q8C2S0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.82■■■□□ 2.2
Usp44Q8C2S0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Usp44Q8C2S0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Usp44Q8C2S0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Usp44Q8C2S0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Usp44Q8C2S0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Usp44Q8C2S0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Usp44Q8C2S0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Usp44Q8C2S0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Usp44Q8C2S0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Usp44Q8C2S0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Usp44Q8C2S0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Usp44Q8C2S0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Usp44Q8C2S0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Usp44Q8C2S0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Usp44Q8C2S0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Usp44Q8C2S0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Usp44Q8C2S0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Usp44Q8C2S0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Usp44Q8C2S0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Usp44Q8C2S0 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.7■■■□□ 2.18
Usp44Q8C2S0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp44Q8C2S0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.68■■■□□ 2.18
Usp44Q8C2S0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Usp44Q8C2S0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp44Q8C2S0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp44Q8C2S0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp44Q8C2S0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.66■■■□□ 2.18
Usp44Q8C2S0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp44Q8C2S0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Usp44Q8C2S0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Usp44Q8C2S0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Usp44Q8C2S0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Usp44Q8C2S0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.65■■■□□ 2.18
Usp44Q8C2S0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.64■■■□□ 2.18
Usp44Q8C2S0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Usp44Q8C2S0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.63■■■□□ 2.17
Usp44Q8C2S0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Usp44Q8C2S0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.62■■■□□ 2.17
Usp44Q8C2S0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Usp44Q8C2S0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.59■■■□□ 2.17
Usp44Q8C2S0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Usp44Q8C2S0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Usp44Q8C2S0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Usp44Q8C2S0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Usp44Q8C2S0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Usp44Q8C2S0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Usp44Q8C2S0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Usp44Q8C2S0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Usp44Q8C2S0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Usp44Q8C2S0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Usp44Q8C2S0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Usp44Q8C2S0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Usp44Q8C2S0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Usp44Q8C2S0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Usp44Q8C2S0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Usp44Q8C2S0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp44Q8C2S0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp44Q8C2S0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp44Q8C2S0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Usp44Q8C2S0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Usp44Q8C2S0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Usp44Q8C2S0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms