Protein–RNA interactions for Protein: Q8BTY8

Scfd2, Sec1 family domain-containing protein 2, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd2Q8BTY8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scfd2Q8BTY8 Gm7432-201ENSMUST00000210343 879 ntBASIC28.5■■■□□ 2.15
Scfd2Q8BTY8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Scfd2Q8BTY8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.49■■■□□ 2.15
Scfd2Q8BTY8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Scfd2Q8BTY8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Scfd2Q8BTY8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.48■■■□□ 2.15
Scfd2Q8BTY8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Scfd2Q8BTY8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Scfd2Q8BTY8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scfd2Q8BTY8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Scfd2Q8BTY8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.45■■■□□ 2.14
Scfd2Q8BTY8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Scfd2Q8BTY8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scfd2Q8BTY8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scfd2Q8BTY8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd2Q8BTY8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd2Q8BTY8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Scfd2Q8BTY8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Scfd2Q8BTY8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.42■■■□□ 2.14
Scfd2Q8BTY8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd2Q8BTY8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.41■■■□□ 2.14
Scfd2Q8BTY8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scfd2Q8BTY8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Scfd2Q8BTY8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Scfd2Q8BTY8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Scfd2Q8BTY8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Scfd2Q8BTY8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Scfd2Q8BTY8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Scfd2Q8BTY8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Scfd2Q8BTY8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.35■■■□□ 2.13
Scfd2Q8BTY8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.35■■■□□ 2.13
Scfd2Q8BTY8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.34■■■□□ 2.13
Scfd2Q8BTY8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Scfd2Q8BTY8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.32■■■□□ 2.12
Scfd2Q8BTY8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Scfd2Q8BTY8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.31■■■□□ 2.12
Scfd2Q8BTY8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Scfd2Q8BTY8 Gm11599-201ENSMUST00000118720 878 ntBASIC28.3■■■□□ 2.12
Scfd2Q8BTY8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.3■■■□□ 2.12
Scfd2Q8BTY8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Scfd2Q8BTY8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Scfd2Q8BTY8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.29■■■□□ 2.12
Scfd2Q8BTY8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Scfd2Q8BTY8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Scfd2Q8BTY8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Scfd2Q8BTY8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Scfd2Q8BTY8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.27■■■□□ 2.12
Scfd2Q8BTY8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Scfd2Q8BTY8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Scfd2Q8BTY8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scfd2Q8BTY8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.24■■■□□ 2.11
Scfd2Q8BTY8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Scfd2Q8BTY8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Scfd2Q8BTY8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.22■■■□□ 2.11
Scfd2Q8BTY8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.21■■■□□ 2.11
Scfd2Q8BTY8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Scfd2Q8BTY8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Scfd2Q8BTY8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Scfd2Q8BTY8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Scfd2Q8BTY8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Scfd2Q8BTY8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Scfd2Q8BTY8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.18■■■□□ 2.1
Scfd2Q8BTY8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Scfd2Q8BTY8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Scfd2Q8BTY8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Scfd2Q8BTY8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Scfd2Q8BTY8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Scfd2Q8BTY8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd2Q8BTY8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.15■■■□□ 2.1
Scfd2Q8BTY8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd2Q8BTY8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd2Q8BTY8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.14■■■□□ 2.1
Scfd2Q8BTY8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
Scfd2Q8BTY8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.14■■■□□ 2.09
Scfd2Q8BTY8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scfd2Q8BTY8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.11■■■□□ 2.09
Scfd2Q8BTY8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.1■■■□□ 2.09
Scfd2Q8BTY8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Scfd2Q8BTY8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scfd2Q8BTY8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scfd2Q8BTY8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scfd2Q8BTY8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Scfd2Q8BTY8 Gm30023-201ENSMUST00000197970 889 ntBASIC28.08■■■□□ 2.09
Scfd2Q8BTY8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
Scfd2Q8BTY8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Scfd2Q8BTY8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Scfd2Q8BTY8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Scfd2Q8BTY8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Scfd2Q8BTY8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.04■■■□□ 2.08
Scfd2Q8BTY8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Scfd2Q8BTY8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Scfd2Q8BTY8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.03■■■□□ 2.08
Scfd2Q8BTY8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.03■■■□□ 2.08
Scfd2Q8BTY8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 205.8 ms