Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.05■□□□□ 0.32
SCXQ7RTU7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.05■□□□□ 0.32
SCXQ7RTU7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCXQ7RTU7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCXQ7RTU7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.04■□□□□ 0.32
SCXQ7RTU7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCXQ7RTU7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCXQ7RTU7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCXQ7RTU7 ZNRF2P2-203ENST00000454624 420 ntBASIC17.04■□□□□ 0.32
SCXQ7RTU7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCXQ7RTU7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SCXQ7RTU7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.03■□□□□ 0.32
SCXQ7RTU7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.03■□□□□ 0.32
SCXQ7RTU7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCXQ7RTU7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCXQ7RTU7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCXQ7RTU7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCXQ7RTU7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCXQ7RTU7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.02■□□□□ 0.32
SCXQ7RTU7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCXQ7RTU7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCXQ7RTU7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCXQ7RTU7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCXQ7RTU7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.01■□□□□ 0.31
SCXQ7RTU7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCXQ7RTU7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCXQ7RTU7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCXQ7RTU7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SCXQ7RTU7 DUX4L29-201ENST00000425409 679 ntBASIC17■□□□□ 0.31
SCXQ7RTU7 HLA-V-202ENST00000446817 847 ntBASIC17■□□□□ 0.31
SCXQ7RTU7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17■□□□□ 0.31
SCXQ7RTU7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCXQ7RTU7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.99■□□□□ 0.31
SCXQ7RTU7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCXQ7RTU7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCXQ7RTU7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.99■□□□□ 0.31
SCXQ7RTU7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCXQ7RTU7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.99■□□□□ 0.31
SCXQ7RTU7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCXQ7RTU7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCXQ7RTU7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCXQ7RTU7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.98■□□□□ 0.31
SCXQ7RTU7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCXQ7RTU7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCXQ7RTU7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.96■□□□□ 0.31
SCXQ7RTU7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCXQ7RTU7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.96■□□□□ 0.31
SCXQ7RTU7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCXQ7RTU7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.96■□□□□ 0.31
SCXQ7RTU7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCXQ7RTU7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCXQ7RTU7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCXQ7RTU7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCXQ7RTU7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCXQ7RTU7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCXQ7RTU7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCXQ7RTU7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCXQ7RTU7 ABCB10P1-201ENST00000614297 2181 ntBASIC16.94■□□□□ 0.3
SCXQ7RTU7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCXQ7RTU7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCXQ7RTU7 AC108673.1-201ENST00000510422 1159 ntBASIC16.94■□□□□ 0.3
SCXQ7RTU7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCXQ7RTU7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.94■□□□□ 0.3
SCXQ7RTU7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCXQ7RTU7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCXQ7RTU7 AC021231.2-201ENST00000594613 730 ntBASIC16.93■□□□□ 0.3
SCXQ7RTU7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SCXQ7RTU7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCXQ7RTU7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCXQ7RTU7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCXQ7RTU7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.92■□□□□ 0.3
SCXQ7RTU7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCXQ7RTU7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.91■□□□□ 0.3
SCXQ7RTU7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCXQ7RTU7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCXQ7RTU7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCXQ7RTU7 MIR6090-201ENST00000622481 60 ntBASIC16.91■□□□□ 0.3
SCXQ7RTU7 AC120057.4-201ENST00000624722 1615 ntBASIC16.91■□□□□ 0.3
SCXQ7RTU7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC16.9■□□□□ 0.3
SCXQ7RTU7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCXQ7RTU7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC16.9■□□□□ 0.3
SCXQ7RTU7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.89■□□□□ 0.3
SCXQ7RTU7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCXQ7RTU7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCXQ7RTU7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCXQ7RTU7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.89■□□□□ 0.29
SCXQ7RTU7 ABCB10P3-201ENST00000561950 2166 ntBASIC16.89■□□□□ 0.29
SCXQ7RTU7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCXQ7RTU7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCXQ7RTU7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SCXQ7RTU7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.88■□□□□ 0.29
SCXQ7RTU7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.88■□□□□ 0.29
SCXQ7RTU7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SCXQ7RTU7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCXQ7RTU7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCXQ7RTU7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.87■□□□□ 0.29
SCXQ7RTU7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCXQ7RTU7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCXQ7RTU7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SCXQ7RTU7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms