Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHST3Q7LGC8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHST3Q7LGC8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHST3Q7LGC8 AC010864.1-201ENST00000609407 1511 ntBASIC31.16■■■□□ 2.58
CHST3Q7LGC8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHST3Q7LGC8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.15■■■□□ 2.58
CHST3Q7LGC8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHST3Q7LGC8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHST3Q7LGC8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHST3Q7LGC8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHST3Q7LGC8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.12■■■□□ 2.57
CHST3Q7LGC8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHST3Q7LGC8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHST3Q7LGC8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHST3Q7LGC8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.11■■■□□ 2.57
CHST3Q7LGC8 AP006261.1-201ENST00000584783 668 ntBASIC31.11■■■□□ 2.57
CHST3Q7LGC8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.1■■■□□ 2.57
CHST3Q7LGC8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHST3Q7LGC8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
CHST3Q7LGC8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHST3Q7LGC8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.09■■■□□ 2.57
CHST3Q7LGC8 MIR3665-201ENST00000578708 105 ntBASIC31.09■■■□□ 2.57
CHST3Q7LGC8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHST3Q7LGC8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHST3Q7LGC8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHST3Q7LGC8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHST3Q7LGC8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHST3Q7LGC8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.07■■■□□ 2.56
CHST3Q7LGC8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHST3Q7LGC8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHST3Q7LGC8 AC139426.1-201ENST00000568218 2529 ntBASIC31.05■■■□□ 2.56
CHST3Q7LGC8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CHST3Q7LGC8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.04■■■□□ 2.56
CHST3Q7LGC8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHST3Q7LGC8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.04■■■□□ 2.56
CHST3Q7LGC8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHST3Q7LGC8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHST3Q7LGC8 AC087741.3-201ENST00000624270 1347 ntBASIC31.02■■■□□ 2.56
CHST3Q7LGC8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHST3Q7LGC8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHST3Q7LGC8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CHST3Q7LGC8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHST3Q7LGC8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.01■■■□□ 2.55
CHST3Q7LGC8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHST3Q7LGC8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHST3Q7LGC8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31■■■□□ 2.55
CHST3Q7LGC8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHST3Q7LGC8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CHST3Q7LGC8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHST3Q7LGC8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHST3Q7LGC8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
CHST3Q7LGC8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHST3Q7LGC8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
CHST3Q7LGC8 ABCB10P3-201ENST00000561950 2166 ntBASIC30.95■■■□□ 2.55
CHST3Q7LGC8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHST3Q7LGC8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHST3Q7LGC8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.95■■■□□ 2.54
CHST3Q7LGC8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.95■■■□□ 2.54
CHST3Q7LGC8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHST3Q7LGC8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHST3Q7LGC8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHST3Q7LGC8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHST3Q7LGC8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHST3Q7LGC8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
CHST3Q7LGC8 MIR6090-201ENST00000622481 60 ntBASIC30.92■■■□□ 2.54
CHST3Q7LGC8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
CHST3Q7LGC8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHST3Q7LGC8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHST3Q7LGC8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHST3Q7LGC8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHST3Q7LGC8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.91■■■□□ 2.54
CHST3Q7LGC8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CHST3Q7LGC8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHST3Q7LGC8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHST3Q7LGC8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CHST3Q7LGC8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CHST3Q7LGC8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.53
CHST3Q7LGC8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.88■■■□□ 2.53
CHST3Q7LGC8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.88■■■□□ 2.53
CHST3Q7LGC8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHST3Q7LGC8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHST3Q7LGC8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHST3Q7LGC8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHST3Q7LGC8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHST3Q7LGC8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHST3Q7LGC8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHST3Q7LGC8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHST3Q7LGC8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHST3Q7LGC8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHST3Q7LGC8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CHST3Q7LGC8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
CHST3Q7LGC8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHST3Q7LGC8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
CHST3Q7LGC8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHST3Q7LGC8 AC108673.1-201ENST00000510422 1159 ntBASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms