Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.1■■■□□ 2.73
USP50Q70EL3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
USP50Q70EL3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.08■■■□□ 2.73
USP50Q70EL3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP50Q70EL3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.06■■■□□ 2.72
USP50Q70EL3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
USP50Q70EL3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
USP50Q70EL3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
USP50Q70EL3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP50Q70EL3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP50Q70EL3 GPX1-201ENST00000419349 1106 ntBASIC32.02■■■□□ 2.72
USP50Q70EL3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
USP50Q70EL3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
USP50Q70EL3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32■■■□□ 2.71
USP50Q70EL3 RNF126P1-201ENST00000567452 1320 ntBASIC32■■■□□ 2.71
USP50Q70EL3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
USP50Q70EL3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
USP50Q70EL3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
USP50Q70EL3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.98■■■□□ 2.71
USP50Q70EL3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
USP50Q70EL3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
USP50Q70EL3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.96■■■□□ 2.71
USP50Q70EL3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
USP50Q70EL3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
USP50Q70EL3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
USP50Q70EL3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
USP50Q70EL3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
USP50Q70EL3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.91■■■□□ 2.7
USP50Q70EL3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
USP50Q70EL3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP50Q70EL3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP50Q70EL3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
USP50Q70EL3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
USP50Q70EL3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.86■■■□□ 2.69
USP50Q70EL3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
USP50Q70EL3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.85■■■□□ 2.69
USP50Q70EL3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.84■■■□□ 2.69
USP50Q70EL3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.83■■■□□ 2.69
USP50Q70EL3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.83■■■□□ 2.69
USP50Q70EL3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.82■■■□□ 2.68
USP50Q70EL3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.82■■■□□ 2.68
USP50Q70EL3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP50Q70EL3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
USP50Q70EL3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.8■■■□□ 2.68
USP50Q70EL3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
USP50Q70EL3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
USP50Q70EL3 NTF6A-201ENST00000591175 560 ntBASIC31.79■■■□□ 2.68
USP50Q70EL3 AC012354.3-201ENST00000623734 483 ntBASIC31.78■■■□□ 2.68
USP50Q70EL3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
USP50Q70EL3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.77■■■□□ 2.68
USP50Q70EL3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
USP50Q70EL3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
USP50Q70EL3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
USP50Q70EL3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.75■■■□□ 2.67
USP50Q70EL3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP50Q70EL3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP50Q70EL3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
USP50Q70EL3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
USP50Q70EL3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.71■■■□□ 2.67
USP50Q70EL3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.7■■■□□ 2.67
USP50Q70EL3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.7■■■□□ 2.67
USP50Q70EL3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.7■■■□□ 2.66
USP50Q70EL3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
USP50Q70EL3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.68■■■□□ 2.66
USP50Q70EL3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.67■■■□□ 2.66
USP50Q70EL3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.67■■■□□ 2.66
USP50Q70EL3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.67■■■□□ 2.66
USP50Q70EL3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP50Q70EL3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.66■■■□□ 2.66
USP50Q70EL3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
USP50Q70EL3 AC022413.1-201ENST00000624602 984 ntBASIC31.65■■■□□ 2.66
USP50Q70EL3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP50Q70EL3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP50Q70EL3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.63■■■□□ 2.65
USP50Q70EL3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP50Q70EL3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
USP50Q70EL3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
USP50Q70EL3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP50Q70EL3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms